XiaodanXing / SAM4organoidLinks
The github repository for our paper SegmentAnything helps microscopy images based automatic and quantitative organoid detection and analysis
☆11Updated 2 years ago
Alternatives and similar repositories for SAM4organoid
Users that are interested in SAM4organoid are comparing it to the libraries listed below
Sorting:
- Repository in Support of EAGLE Submission☆19Updated 2 months ago
- ☆35Updated this week
- Build-A-Cell protocol for making liposomes☆13Updated last year
- TABS: Transformer-based Automated Brain Segmentation☆20Updated 2 years ago
- We trained high performing open source models on image scans of tissue biopsies to predict endoscopic categories in inflammatory bowel di…☆16Updated 2 years ago
- ☆19Updated last year
- A neural network software for using Molecular labelling to improve pathological annotation of H and E tissues☆32Updated 10 months ago
- Pan-cancer tils analysis study by Hongming Xu☆14Updated 5 years ago
- Hyper-AdaC: Adaptive clustering-based hypergraph representation of whole slide images for survival analysis☆16Updated 3 years ago
- Hibou: Foundational Models for Pathology☆75Updated last year
- A Versatile and Open Source One- and Two-Photon Light-Sheet Microscope Design☆12Updated 2 years ago
- This is the official implementation of the method ContIG, for self-supervised learning from medical imaging with genomics☆57Updated 3 years ago
- Contrastive multi-omics association learning☆12Updated 3 months ago
- 🚀 H2G-Net: Segmentation of breast cancer region from whole slide images☆28Updated 5 months ago
- Interactive deep learning whole-cell segmentation and thresholding using partial annotations☆41Updated this week
- Multi-task deep learning framework for multi-omics data analysis☆48Updated 3 years ago
- SAM2PATH paper code repo☆41Updated 9 months ago
- 🐝 | From Data to Prognosis: Embedding Multimodal Oncology Data for Precision Medicine☆26Updated 2 weeks ago
- Python package to export tensorflow models as DeepImageJ bundled models☆17Updated 3 years ago
- computer vision models for single-cell phenotyping☆77Updated this week
- (NeurIPS 2022 CellSeg Challenge - 1st Winner) Open source code for "MEDIAR: Harmony of Data-Centric and Model-Centric for Multi-Modality …☆155Updated last year
- Python package for deep learning based image to image transformation☆53Updated last month
- A deep learning model for single cell segmentation from microsopy images.☆36Updated this week
- Learning-based Inference of Longitudinal imAge Changes (LILAC)☆14Updated 9 months ago
- Scalable Instance Segmentation using PyTorch & PyTorch Lightning.☆145Updated 7 months ago
- Cloud-based data annotation tools for biological images☆82Updated last year
- Official repo for Recursion's accepted spotlight paper at NeurIPS 2023 Generative AI & Biology workshop.☆69Updated 6 months ago
- ☆15Updated last year
- ☆29Updated 2 weeks ago
- Openwater's Open-Source Neuromodulation Software☆24Updated last year