parallel FSL processing without requiring SGE
☆28Sep 3, 2021Updated 5 years ago
Alternatives and similar repositories for fsl_sub
Users that are interested in fsl_sub are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Flexible modeling of neuroimaging data in R☆34Sep 14, 2020Updated 6 years ago
- Introduction to Python for neuroimaging (MRI) analysis☆21Sep 12, 2019Updated 7 years ago
- Python-based Reliability in MRI: Calculating Group level and Individual Level Similarity between runs and sessions.☆39Sep 24, 2025Updated 11 months ago
- ☆25Updated this week
- Calculate chlorpromazine-equivalent doses in R☆15Mar 14, 2021Updated 5 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Real-time tractogram computer and visualizer☆16Dec 21, 2022Updated 3 years ago
- ICA-AROMA Software Package: a data-driven method to identify and remove head motion-related artefacts from functional MRI data.☆108May 17, 2024Updated 2 years ago
- Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps☆96Jul 31, 2025Updated last year
- Cross-platform automatic AC-PC realignment/reorientation and coregistration robust to brain damage in SPM☆16Jun 28, 2024Updated 2 years ago
- Support for CMRR multi-band pulse sequences☆63Apr 30, 2026Updated 4 months ago
- Reproduce the artice Hoy et al. 2014 Optimization of a free water elimination two-compartment model for diffusion tensor imaging. Neuroim…☆14Apr 12, 2019Updated 7 years ago
- A few routines to perform "auto reorient" in SPM☆18Jan 11, 2023Updated 3 years ago
- Effective Functions for mixed model☆13Jul 10, 2024Updated 2 years ago
- Convert various image formats to NIfTI.☆14Jul 30, 2022Updated 4 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- The ENIGMA Toolbox is an open-source repository for accessing 100+ ENIGMA statistical maps, visualizing cortical and subcortical surface …☆188Jan 15, 2026Updated 8 months ago
- Write great documents with markdown, then execute in the shell.☆10Sep 1, 2017Updated 9 years ago
- Parse Siemens PMU files☆15Jul 7, 2024Updated 2 years ago
- A VM setup for use in fMRI analysis and education☆58Aug 20, 2024Updated 2 years ago
- Accelerated Microstructure Imaging via Convex Optimization (AMICO) from diffusion MRI data☆130Dec 19, 2025Updated 9 months ago
- Code for projecting volumetric nifti files to HCP surface and Glasser atlas parcel-wise value extraction☆12May 21, 2023Updated 3 years ago
- Public repository of cmig_tools including FEMA☆24Nov 8, 2024Updated last year
- The Starter-kit has moved to the new BIDS website.☆277Aug 20, 2026Updated last month
- Matlab code for performing image reconstruction in MRI and performing the NORDIC denoising☆79Jul 3, 2026Updated 2 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain☆379Updated this week
- A BIDS App for minimal preprocessing using the HCP Pipelines☆38Mar 16, 2026Updated 6 months ago
- DTIPrep performs a "Study-specific Protocol" based automatic pipeline for DWI/DTI quality control and preparation☆19Mar 9, 2021Updated 5 years ago
- DICOM to NIfTI conversion, NIfTI tools☆103Apr 1, 2026Updated 5 months ago
- Lesion Identification with Neighborhood Data Analysis☆21May 1, 2020Updated 6 years ago
- BIDS app wrapping recon-all from FreeSurfer☆47Jul 24, 2026Updated last month
- Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)☆170Sep 9, 2026Updated 2 weeks ago
- A Dockerfile to create a Ubuntu docker for neuroimaging☆10Nov 11, 2018Updated 7 years ago
- Code for 2nd edition of fMRI analysis handbook☆30Jul 21, 2021Updated 5 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Docker version of HIPS-THOMAS☆42Oct 18, 2025Updated 11 months ago
- niimath - a clone of fslmaths. Try the live demo:☆85Sep 14, 2026Updated last week
- Fit Linear Models to BIDS Datasets☆82Aug 17, 2026Updated last month
- Toolbox for parameter estimation of the Standard Model of diffusion in white matter☆30Apr 6, 2026Updated 5 months ago
- Preprocessing of diffusion MRI☆190Updated this week
- To convert Human Connectome projects(HCP) data to BIDS std☆32Aug 1, 2022Updated 4 years ago
- This is the documentation repository for ongoing releases to the NDA collection 3165. Please add GitHub Issues here for requests or feed…☆17Oct 15, 2025Updated 11 months ago