Tools for dealing with neuroimaging data in the BIDS structure
☆28Nov 21, 2018Updated 7 years ago
Alternatives and similar repositories for bids-tools
Users that are interested in bids-tools are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A set of BIDS compatible datasets with empty raw data files that can be used for writing lightweight software tests.☆213Mar 19, 2026Updated last week
- Validator for the Brain Imaging Data Structure☆184Dec 11, 2025Updated 3 months ago
- Convert T score brain statistical map to Z score map☆19Jan 25, 2024Updated 2 years ago
- MRI preprocessing pipeline☆13May 4, 2018Updated 7 years ago
- Create a BIDS structure for a DICOM folder.☆12Nov 6, 2017Updated 8 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure☆194Mar 6, 2026Updated 3 weeks ago
- PET2BIDS helps you convert your PET data into BIDS! raw PET scanner files (e.g. ecat, dicom) and additional side files like .e.g excel sh…☆31Updated this week
- A curated list of awesome governance resources☆20Aug 31, 2019Updated 6 years ago
- Curation of BIDS (CuBIDS): A sanity-preserving software package for processing BIDS datasets.☆30Mar 16, 2026Updated last week
- JSONio: a MATLAB/Octave JSON library☆10Nov 18, 2023Updated 2 years ago
- These Python notebooks reproduce some figures in the following preprint using the libraries pyMOU and NetDynFlow: https://www.biorxiv.org…☆12Feb 28, 2023Updated 3 years ago
- HiBoP is an application dedicated to the visualization of intracranial brain recordings.☆17Mar 17, 2026Updated last week
- Utility functions for working with DICOM and BIDS neuroimaging data☆65Nov 6, 2025Updated 4 months ago
- fMRI pre-processing project using fMRIPrep, Nilearn on a HPC server.☆11Sep 30, 2022Updated 3 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Visualize and print volumetric brain data☆13Jun 20, 2024Updated last year
- BIDS Manage is a software aiming at importing and organising data in BIDS standard☆10May 24, 2023Updated 2 years ago
- Tool to convert raw MRI datasets to BIDS-compatible datasets☆35Mar 28, 2022Updated 3 years ago
- a Matlab / Octave toolbox for surface-based voxel neighborhood selection on the cerebral cortex, intended for informationg mapping of fun…☆17May 4, 2024Updated last year
- Lightweight Python package to process MP2RAGE and ME-MP2RAGE-data☆24May 12, 2025Updated 10 months ago
- ☆30Feb 13, 2026Updated last month
- Tools for laminar analysis of the cortical sheet in Python☆12Jul 23, 2019Updated 6 years ago
- Generate and run SLURM jobs on HPCs☆12Aug 13, 2025Updated 7 months ago
- Research data management in biomedical and machine learning applications☆30Jul 15, 2025Updated 8 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- BIDScoin converts your source-level neuroimaging data to BIDS☆151Updated this week
- Knowing what you know - Bayesian brain parcellation☆21Sep 3, 2022Updated 3 years ago
- Tools related to analyzing eye tracking data from cogntive sciences experiments☆16Mar 27, 2024Updated 2 years ago
- OpenNeuroLab MetaSearch App☆17Jan 10, 2022Updated 4 years ago
- A standardized form generation and data collection schema to harmonize results by design across projects.☆18Mar 6, 2026Updated 2 weeks ago
- Scripts and documentation for the PCP's protocol for assessing data quality.☆41Oct 4, 2021Updated 4 years ago
- NeuroImaging Quality Control (niQC)☆13Mar 30, 2024Updated last year
- Tools for mesh surface-based operations☆40Mar 3, 2025Updated last year
- Python interface for inspecting and running CLI modules (as defined by CommonTK)☆12Oct 23, 2018Updated 7 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- The Starter-kit has moved to the new BIDS website.☆276Feb 21, 2025Updated last year
- A C++ library for guessing MIME types from filenames☆11May 7, 2019Updated 6 years ago
- Easy and comprehensive assessment of predictive power, with support for neuroimaging features☆104Jan 19, 2026Updated 2 months ago
- NeuroElf (MATLAB)☆18Jan 19, 2025Updated last year
- A repo for tools to aggregate public MRIQC data (Neurohackademy 2019)☆27Aug 21, 2020Updated 5 years ago
- predicting fmri activaties from connectome☆16May 14, 2019Updated 6 years ago
- Pydra Dataflow Engine☆137Mar 16, 2026Updated last week