karthikcl2590 / NeuralTrajLinks
Matlab codepack for performing dimensionality reduction on neural data using TD-GPFA or GPFA.
☆22Updated 8 years ago
Alternatives and similar repositories for NeuralTraj
Users that are interested in NeuralTraj are comparing it to the libraries listed below
Sorting:
- Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)☆46Updated 6 years ago
- A dimensionality reduction framework for disentangling the flow of signals between populations of neurons☆32Updated 4 months ago
- Fitting and analysis of trial-based neural spike responses with Generalized Linear Model (GLM).☆72Updated 5 years ago
- Fitting and simulation of Poisson generalized linear model for single and multi-neuron spike trains (Pillow et al 2008).☆43Updated 6 years ago
- ☆57Updated 10 months ago
- Tools for analyzing spiking data from single-neuron recodings.☆29Updated last month
- Functions to assess quality of spike sorting results☆34Updated 2 years ago
- ☆24Updated last week
- MClust is a Matlab-based spike sorting toolbox for the separation of putative cells from multi-site neurophysiological recordings. It is…☆17Updated 3 years ago
- Code to reproduce figures for "Mice alternate between discrete strategies during perceptual decision-making" from Ashwood, Roy, Stone, IB…☆55Updated 2 years ago
- Codebase for Cross-Spectral Factor Analysis (Gallagher et al., 2017)☆15Updated 5 years ago
- Metrics for spike sorting validation/quality control☆15Updated 4 years ago
- UnitRefine is a machine-learning toolbox that simplifies spike sorting curation by reducing manual curation.☆65Updated 2 weeks ago
- Library to perform Slice Tensor Component Analysis (sliceTCA)☆59Updated 10 months ago
- IBL core shared libraries☆66Updated last week
- WIP: Python port of Kilosort2☆50Updated 2 years ago
- DataHigh: A graphical user interface for visualizing and interacting with high-dimensional neural activity☆18Updated 7 years ago
- Simple tutorial on Gaussian and Poisson GLMs for single and multi-neuron spike train data☆98Updated 3 years ago
- Sparse Component Analysis: An unsupervised method for recovering interpretable latent factors☆29Updated 11 months ago
- Code for Functional Mixed Models for Fiber Photometry☆13Updated 5 months ago
- Some of my python tools for computational neuroscience☆12Updated this week
- Decoding and geometrical analysis of neural activity with built-in best practices☆46Updated last month
- Automatic spike sorting, cluster visualization, spike sorting GUIs☆46Updated last month
- Code accompanying Steinmetz et al., 2019☆60Updated 4 years ago
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.☆71Updated last week
- ☆16Updated 2 years ago
- A GLM based approach to measure CFC☆16Updated 6 years ago
- Fast and scalable spike sorting in python☆95Updated 5 months ago
- Code for internal lab sharing - polishing has started but is by no means complete☆131Updated 2 years ago
- ☆24Updated 6 years ago