bchidest / CFNetLinks
☆26Updated 6 years ago
Alternatives and similar repositories for CFNet
Users that are interested in CFNet are comparing it to the libraries listed below
Sorting:
- Self-supervised learning for microscopy images☆55Updated 5 years ago
- This repository contains the codes to run the nuclei segmentation pipeline of the BIOMAG group inspired by Kaggle's Data Science Bowl 201…☆54Updated 4 years ago
- ☆49Updated 7 years ago
- Analysis of results of the Data Science Bowl 2018☆21Updated 5 years ago
- This code contains the neural network implementation from the nature communication manuscript NCOMMS-16-25447A.☆33Updated 7 years ago
- Survival Convolutional Neural Networks☆68Updated 2 years ago
- Microscopy Image Cytometry Toolkit☆116Updated 2 years ago
- Deep convolutional neural networks for biological motion analysis☆14Updated 6 years ago
- A Python implementation of the model described in our publication "A convolutional neural network for common-coordinate registration of h…☆25Updated 3 years ago
- official implementation of the PatchPerPix instance segmentation method☆33Updated last year
- Code for Nature Scientific Reports 2020 paper: "Unsupervised generative and graph neural methods for modelling cell differentiation" by I…☆18Updated 4 years ago
- Morphological profiling using deep learning☆118Updated 8 months ago
- ☆15Updated 4 years ago
- AICS ML Segmentation (One-Way) Mirror☆27Updated 4 years ago
- A Python package using Gromov-Wasserstein distance to compare cell shapes☆18Updated 4 months ago
- ☆66Updated 2 years ago
- Source code from Bray et al., (2017) A dataset of images and morphological profiles of 30,000 small-molecule treatments using the Cell Pa…☆41Updated last year
- A High-Throughput Workflow for Preprocessing, Deep Learning Analytics and Interpretation in Digital Pathology☆40Updated 2 years ago
- U-net based segmentation of nuclei in microscopy images☆53Updated 6 years ago
- Predicting Cell Health with Morphological Profiles☆37Updated 3 years ago
- AffinityNet with feature attention layer and kNN attention pooling layer for few-shot semi-supervised learning☆38Updated 6 years ago
- SegmenTation Analysis by ParaLlelization of 3D Datasets☆11Updated last year
- Stain normalization parameters used in the paper "F. Ciompi et al., The importance of stain normalization in colorectal tissue classifica…☆28Updated 6 years ago
- TMARKER is a software for cancer cell nucleus detection, segmentation, counting, and classification.☆14Updated 8 years ago
- ☆25Updated 4 years ago
- CapSurv: Capsule Network for Survival Analysis With Whole Slide Pathological Images☆10Updated 6 years ago
- Python Implementation of SIMLR for single-cell visualization and analysis☆23Updated 2 years ago
- Python scripts for tracking cells in fluorescent microscopy.☆11Updated 7 years ago
- ☆46Updated 6 years ago
- Dense Steerable Filter CNN☆75Updated 2 years ago