awslabs / aws-parallelcluster-pipeline-gatk-quick-start
☆15Updated 5 years ago
Alternatives and similar repositories for aws-parallelcluster-pipeline-gatk-quick-start:
Users that are interested in aws-parallelcluster-pipeline-gatk-quick-start are comparing it to the libraries listed below
- ☆68Updated 3 months ago
- ☆11Updated 3 years ago
- This solution provides a framework for Next Generation Sequencing (NGS) genomics secondary-analysis pipelines using AWS Step Functions an…☆39Updated last year
- A cloud-based deployment of the 10x Genomics Cell Ranger software☆13Updated 5 years ago
- ☆27Updated last month
- ☆147Updated 11 months ago
- AWS Quick Start Team☆24Updated 6 months ago
- Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integr…☆69Updated this week
- MIRROR OF: The European Molecular Biology Open Software Suite (from git://anonscm.debian.org/debian-med/emboss.git)☆26Updated 3 years ago
- This project contains the webapp sample integrated with AWS HealthOmics, which allows users such as admin and bioinformaticians to operat…☆18Updated 4 months ago
- ☆18Updated 2 years ago
- Bio-dockers: dockerized bioinformatic tools☆32Updated 3 months ago
- Linter rules for Nextflow DSL scripts☆32Updated 3 weeks ago
- small RNA analysis from NGS data☆37Updated 7 months ago
- This project is deprecated, please see strelka2 at https://github.com/Illumina/strelka☆37Updated 8 years ago
- ☆62Updated 8 years ago
- Tools for next-generation sequencing analysis☆88Updated 5 years ago
- Support code for NGS copy number algorithms. Takes a file of locations and a [cr|b]am file and generates a count of coverage of each alle…☆44Updated 2 years ago
- Human Pangenome Reference Consortium - HG002 Data Freeze (v1.0)☆78Updated 2 years ago
- Workflow Description Language compiler for the DNAnexus platform☆40Updated last year
- Workflows for germline short variant discovery in WGS data. PairedEndSingleSampleWf has been superseded in Broad production by https://gi…☆55Updated 5 years ago
- Mostly deprecated. See https://github.com/PacificBiosciences/FALCON_unzip/wiki/Binaries☆31Updated 7 years ago
- an empirical Bayesian framework for mutation detection from cancer genome sequencing data☆31Updated 9 years ago
- Repository of Nextflow+BioContainers workflows☆14Updated 3 years ago
- Workflows used for WGS data processing -- replaced by https://github.com/gatk-workflows/gatk4-genome-processing-pipeline☆57Updated 5 years ago
- An interactive learning resource for next-generation sequencing (NGS) techniques☆28Updated 6 years ago
- identifying mutational significance in cancer genomes☆61Updated 2 years ago
- An Artificial Neural Network-based discriminator for validating clinically significant genomic variants☆35Updated last year
- gnomAD browser pre-ASHG 2018☆33Updated 4 years ago
- Deep Learning based variant calling toolkit - https://clara-parabricks.github.io/VariantWorks/☆45Updated 2 years ago