bigbio / nf-workflowsLinks
Repository of Nextflow+BioContainers workflows
☆14Updated 4 years ago
Alternatives and similar repositories for nf-workflows
Users that are interested in nf-workflows are comparing it to the libraries listed below
Sorting:
- A standalone interactive application for detecting biological significance on a set of genes☆40Updated 4 years ago
- Genomic data interpretation and visualization Workshop☆21Updated 2 weeks ago
- An interactive web-tool for RNA-seq analysis☆70Updated 9 months ago
- B-cell and T-cell Adaptive Immune Receptor Repertoire (AIRR) sequencing analysis pipeline using the Immcantation framework☆69Updated this week
- ☆50Updated 4 years ago
- Visual exploratory analysis of gene expression data☆43Updated 2 weeks ago
- Nextflow RNA-Seq Best Practice analysis pipeline, used at the SciLifeLab National Genomics Infrastructure.☆51Updated 7 years ago
- A pipeline for differential expression and differential alternative splicing analysis☆66Updated last year
- A workflow for enhanced protein isoform detection through integration of long-read RNA-seq and mass spectrometry-based proteomics.☆50Updated 2 years ago
- Sphinx documentation source for a computational genomics tutorial.☆35Updated 4 years ago
- A comprehensive cancer DNA/RNA analysis and reporting pipeline☆96Updated this week
- deepStats: a stastitical toolbox for deeptools and genomic signals☆35Updated 4 years ago
- Unsorted scripts for bioinformatics☆61Updated 4 years ago
- Bioinformatics analysis scripts, workflows, general code examples☆54Updated 4 years ago
- Tool for RNA-Seq analysis.☆39Updated 3 years ago
- Bioinformatic Analysis pipeLine for SomAtic Mutations In Cancer☆56Updated this week
- A Snakemake workflow for differential expression analysis of RNA-seq data with Kallisto and Sleuth.☆68Updated this week
- The Zavolab Automated RNA-seq Pipeline☆36Updated 4 months ago
- Shiny ClinVar web server source code☆12Updated 6 years ago
- ☆29Updated 6 years ago
- Differential gene expression analysis and pathway analysis of RNAseq data☆32Updated 4 months ago
- RNAseq pipeline based on snakemake☆26Updated 2 years ago
- ☆33Updated 3 years ago
- ☆33Updated 6 months ago
- Reference genome resource manager☆74Updated last year
- Tool for parsing outputs from fusion detection tools. Part of a nf-core/rnafusion pipeline. Checkout a live demo at https://matq007.githu…☆28Updated 5 months ago
- Workflow management with Nextflow and nf-core☆27Updated 10 months ago
- Proteomics label-free quantification (LFQ) analysis pipeline☆36Updated 10 months ago
- An R interface to the MEME Suite☆53Updated 5 months ago
- GREIN : GEO RNA-seq Experiments Interactive Navigator☆50Updated 6 years ago