connectomicslab / connectomemapper3
Connectome Mapper 3 is a BIDS App that implements full anatomical, diffusion, resting/state functional MRI, and recently EEG processing pipelines, from raw T1 / DWI / BOLD , and preprocessed EEG data to multi-resolution brain parcellation with corresponding connection matrices.
☆71Updated 3 months ago
Related projects ⓘ
Alternatives and complementary repositories for connectomemapper3
- multi atlas transfer tools for neuroimaging (maTT)☆61Updated this week
- This repository will host scripts used to map structural and functional brain connectivity matrices for the UK biobank dataset.☆62Updated 11 months ago
- The TemplateFlow Archive - A DataLad super-dataset☆72Updated 7 months ago
- MATLAB code for reading and writing CIFTI connectivity files☆65Updated last month
- BrainSpace is an open-access toolbox that allows for the identification and analysis of gradients from neuroimaging and connectomics data…☆188Updated last week
- ☆85Updated 7 years ago
- BIDScoin converts your source-level neuroimaging data to BIDS☆130Updated 2 weeks ago
- Open Scripts and pipelines from the Multimodal Imaging and Connectome Analysis Lab at the Montreal Neurological Institute☆73Updated last month
- Preprocessing of diffusion MRI☆140Updated this week
- Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data☆72Updated 3 years ago
- ☆168Updated last year
- Post-processing of fMRIPrep, NiBabies, and HCP outputs☆78Updated this week
- Utilities to use HCP and HCP-like data with nilearn and other Python tools☆41Updated last year
- ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data☆74Updated this week
- Nuisance removal tool for fMRI data☆55Updated 8 months ago
- A package to create simple 3D network visualizations on a brain.☆67Updated last month
- A Python implementation of the brain connectivity toolbox. **Not actively maintained.**☆30Updated 2 years ago
- ☆100Updated last year
- Harmonization tools for multi-site neuroimaging analysis. Implemented as a python package. Harmonization of MRI, sMRI, dMRI, fMRI variabl…☆83Updated 5 months ago
- Load fMRIprep confounds in python☆36Updated 2 years ago
- A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data☆57Updated last week
- Plot the boundaries of ROIs on a surface☆64Updated 5 months ago
- Reproducible and Programmatic Human Neuroimaging Visualisations☆76Updated last year
- micapipe from the Multimodal imaging and connectome analysis lab (http://mica-mni.github.io) at the Montreal Neurological Institute. Read…☆90Updated 2 weeks ago
- A statistics and context decoding toolbox for neuroimaging.☆95Updated last month
- Brain signature patterns, atlases of regions, and meta-analysis masks for neuroimaging data analysis.☆109Updated this week
- Group ICA/IVA software (MATLAB)☆72Updated this week
- Generate subject connectomes from raw BIDS data & perform inter-subject connection density normalisation, using the MRtrix3 software pac…☆50Updated last year
- resting-state fmri tools☆32Updated 3 years ago
- Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)☆134Updated this week