Alternatives and similar repositories for QDECR

Users that are interested in QDECR are comparing it to the libraries listed below

• dfsp-spirit / fsbrain
  R library for structural neuroimaging. Provides high-level functions to access (read and write) and visualize surface-based brain morphom…
  ☆74Updated 8 months ago
• chrisgorgo / alleninf
  Compare a statistical map of a brain with gene expression patterns from Allen Human Brain Atlas.
  ☆30Updated 6 years ago
• kwagstyl / surface_tools
  Tools for mesh surface-based operations
  ☆36Updated 5 months ago
• dfsp-spirit / freesurferformats
  GNU R package for reading and writing neuroimaging file formats. Not limited to FreeSurfer anymore, despite its name.
  ☆23Updated 3 months ago
• dorianps / LESYMAP
  Lesion to Symptom Mapping in R
  ☆33Updated last year
• sulantha2006 / VoxelStats
  A MATLAB package for multi-modal voxel-wise brain image analysis
  ☆15Updated 2 years ago
• andy1764 / ComBatFamily
  ComBat Family of Harmonization Methods
  ☆20Updated 10 months ago
• TomMaullin / BLMM
  This repository contains all code for the BLMM toolbox.
  ☆20Updated last year
• ucl-pond / SuStaInMatlab
  Subtype and Stage Inference [Young+, Nature Communications 2018]
  ☆13Updated 4 years ago
• mandymejia / ciftiTools
  ciftiTools R package
  ☆49Updated last month
• andersonwinkler / PermCCA
  Permutation inference for Canonical Correlation Analysis
  ☆24Updated 11 months ago
• raamana / visualqc
  VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.
  ☆73Updated last month
• RafaelRomeroGarcia / geneExpression_Repository
  Maps gene samples into surface parcellation
  ☆19Updated 7 years ago
• scilus / tractoflow
  TractoFlow: A robust, efficient and reproducible diffusion MRI pipeline leveraging Nextflow & Singularity
  ☆59Updated 10 months ago
• benfulcher / GeneCategoryEnrichmentAnalysis
  Toolbox for performing gene set enrichment analysis in Matlab (including ensemble enrichment)
  ☆17Updated last year
• andersonwinkler / PALM
  PALM: Permutation Analysis of Linear Models
  ☆75Updated 2 months ago
• molecular-neuroimaging / Imaging_Transcriptomics
  A package, and script, to perform imaging transcriptomics on a neuroimaging scan.
  ☆15Updated last year
• muschellij2 / fslr
  FSL-R Interface package
  ☆42Updated 2 weeks ago
• LeonDLotter / ABAnnotate
  A toolbox for ensemble-based multimodal gene-category enrichment analysis of human neuroimaging data. DEPRICATED! Succeeded by "NiSpace"
  ☆19Updated 2 months ago
• illdopejake / Hippocampus_AP_Axis
  Code used for Hippocampus Anterior/Posterior gene expression and neuroimaging analyses
  ☆10Updated 2 years ago
• Qoala-T / QC
  Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data
  ☆77Updated 4 years ago
• sidchop / brainconn
  Brainconn - an R package for visualising brain connectivity data in 2D and interactive 3D
  ☆58Updated 3 months ago
• miykael / parcellation_fragmenter
  Fragments FreeSurfer parcellation annotation in N-equal sized parcels
  ☆28Updated 4 years ago
• MICA-MNI / BrainStat
  A statistics and context decoding toolbox for neuroimaging.
  ☆105Updated 10 months ago
• DevelopmentalImagingMCRI / freesurfer_statsurf_display
  Displays regional stats on Freesurfer surfaces in MATLAB
  ☆15Updated 4 years ago
• rmarkello / abagen
  A toolbox for working with Allen Human Brain Atlas microarray expression data
  ☆103Updated 11 months ago
• spin-test / spin-test
  This toolbox includes MATLAB scripts to perform a "spin test" of anatomical correspondence between cortical surface maps, as presented in…
  ☆53Updated 4 years ago
• nipreps / fmriprep-notebooks
  A repository for notebooks associated with FMRIPREP
  ☆17Updated 6 years ago
• juryxy / JuSpace
  This is the repository for the JuSpace toolbox allowing for cross-modal correlations between imaging data and positron emission tomograph…
  ☆55Updated 4 months ago
• asotiras / brainparts
  NMF Code for calculating components from Brain imaging data.
  ☆16Updated 2 years ago