applied-systems-biology / Dynamic_SPHARMLinks
Software for dynamic spherical harmonic analysis
☆10Updated 5 years ago
Alternatives and similar repositories for Dynamic_SPHARM
Users that are interested in Dynamic_SPHARM are comparing it to the libraries listed below
Sorting:
- Pipeline for putting surface meshes into correspondence☆26Updated 2 years ago
- MorphoFeatures code and data☆22Updated 2 years ago
- Transform 3D cell surfaces into different representations including topographic maps, 3D spheres, and 2D images for doing optimized quant…☆31Updated 3 months ago
- ☆22Updated 2 years ago
- Jupyter notebooks for deep lineage analysis of single-cell heterogeneity and cell cycling duration heritability.☆30Updated 5 years ago
- Block-wise task scheduling for large nD volumes.☆32Updated 8 months ago
- 4D reconstruction of developmental trajectories using spherical harmonics☆23Updated 8 months ago
- Discover, install, and share napari plugins☆54Updated this week
- Detect morphological motifs, such as blebs, filopodia, and lamellipodia, from 3D images of surfaces, particularly images of cell surfaces…☆30Updated 7 months ago
- Gamified image segmentation quality estimation☆19Updated 7 months ago
- Connecting Java/ImgLib2 + Python/NumPy☆30Updated 4 months ago
- Easily read and write ome-tiff images in python☆28Updated last year
- Speed up coding/extending image analysis in Python.☆35Updated 2 months ago
- Kaibu -- a progressive web app for visualizing and annotating multi-dimensional images.☆35Updated 8 months ago
- Python module for registering and fusing multi-view microscopy data☆24Updated 9 months ago
- Resources for teaching/preparing to teach bioimage analysis☆58Updated 3 weeks ago
- A napari plugin for itk-elastix☆39Updated last week
- 3D shape analysis using deep learning☆28Updated 2 months ago
- Segmentation method able to detect membrane/nuclei-labelled cells with low signal-to-noise ratio and dense packing in 2D and 3D. Availabl…☆34Updated 2 months ago
- Tool for segmentation in bioimaging☆35Updated this week
- Process and analyze surfaces using vedo in napari.☆25Updated last year
- a free, open-source web app for annotating, training, and evaluating image understanding algorithms☆25Updated 4 years ago
- ☆49Updated this week
- GPU-accelerated general purpose image processing and image analysis in napari☆36Updated 7 months ago
- Advanced Tool for Labeling And Segmentation☆39Updated last year
- A collection of Image Processing and Analysis (IPA) functions used at the Facility for Advanced Imaging and Microscopy (FAIM)☆18Updated this week
- A 3D interactivity toolbox for napari☆37Updated 5 months ago
- A napari plugin for making animations☆89Updated last week
- An Ilastik-like interactive pixel classifier.☆16Updated last year
- Napari gaming☆17Updated 3 years ago