☆29Jan 30, 2026Updated 4 months ago
Alternatives and similar repositories for DeepScence
Users that are interested in DeepScence are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Senescent Cell Identification☆52Feb 22, 2024Updated 2 years ago
- ☆12Jan 8, 2026Updated 5 months ago
- ☆15Apr 11, 2024Updated 2 years ago
- One-liner for mapping orthologous genes in both R and python using ENSEMBL BioMART☆24Nov 11, 2021Updated 4 years ago
- R package to use EaSIeR to predict anti-tumor immune response from bulk RNA-seq☆15Dec 1, 2025Updated 6 months ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- ☆17Sep 16, 2024Updated last year
- SCRAT: Single-Cell Regulome Analysis Tool☆16Apr 4, 2020Updated 6 years ago
- 🐯 tigeR: Tumor Immunotherapy Gene Expression Data Analysis R package☆55Jan 21, 2026Updated 4 months ago
- Perturb-seq analysis package☆16May 2, 2024Updated 2 years ago
- ☆26Dec 10, 2025Updated 6 months ago
- Python implementation of Gene Trajectory☆30Sep 4, 2024Updated last year
- RADAR is devised to detect and visualize all possible twelve-types of RNA editing events from RNA-seq datasets.☆20Sep 2, 2025Updated 9 months ago
- ☆20Jan 1, 2022Updated 4 years ago
- Multi-agent LLM driven cell type annotation for single-cell RNA-Seq data☆38Apr 30, 2026Updated last month
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Sparse Lazy Array Format (SLAF) for Single-Cell Genomics☆61May 28, 2026Updated 2 weeks ago
- GENOT: Generative Neural Optimal Transport☆16Dec 18, 2024Updated last year
- Human Endometrial Cell Atlas (HECA). An integrated single-cell reference atlas of the human endometrium.☆32Jun 19, 2024Updated last year
- scNODE: Generative Model for Temporal Single Cell Transcriptomic Data Prediction☆32Oct 11, 2024Updated last year
- A computational method scSemiProfiler that provides affordable single-cell data for large-scale disease cohorts using deep generative mod…☆26Jun 7, 2025Updated last year
- Python Toolkit for Transcription Factor Activity Inference and Clustering of scRNA-seq Data☆37Dec 15, 2025Updated 5 months ago
- code related to Shirvalkar et al. 2023 - Nature Neuroscience☆10May 22, 2023Updated 3 years ago
- Hierarchical Cell Annotation☆30Nov 17, 2024Updated last year
- scType goes spatial: ScType enables fast and accurate cell type identification from spatial transcriptomics data☆11Jul 11, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Ordering gene-expression and functional events in single-cell experiments☆32May 31, 2026Updated last week
- MERCI for tracing of mitochondrion transfer between single cancer and T cells☆29May 16, 2024Updated 2 years ago
- A single-cell analysis toolkit to jointly analyze samples from distinct conditions☆37Apr 2, 2025Updated last year
- Metabolic modeling tutorial for EMBO practical course: Metabolite and species dynamics in microbial communities 2022☆13Jan 8, 2024Updated 2 years ago
- R package for normalisation of spatial transcriptomics data☆18Jan 21, 2026Updated 4 months ago
- ☆10Jan 21, 2023Updated 3 years ago
- R package developed for single-cell RNA-seq analysis. It was designed using the Seurat framework, and offers existing and novel single-ce…☆34Nov 28, 2025Updated 6 months ago
- .h5mu files interface for Seurat☆34Nov 28, 2023Updated 2 years ago
- A Chrome/Safari Web Extension that allows to simultaneously submit a prompt to multiple AI chats☆18Nov 17, 2024Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Pan-cancer quantification of neoantigen-mediated immunoediting in cancer evolution☆14May 4, 2022Updated 4 years ago
- ☆43Nov 26, 2025Updated 6 months ago
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆32Dec 3, 2024Updated last year
- fast hierarchical clustering for large-scale single-cell data☆11Jul 11, 2021Updated 4 years ago
- Accurate and fast cell marker gene identification with COSG☆59Mar 7, 2026Updated 3 months ago
- The Artificial Intelligence for Life in Space (AI4LS) team at NASA Ames uses artificial intelligence and machine learning to support and …☆28Jun 5, 2026Updated last week
- scCellFie infers metabolic activities from single-cell and spatial transcriptomics and offers a variety of downstream analyses.☆62May 11, 2026Updated last month