Official implementation for the paper "EBMDOCK: NEURAL PROBABILISTIC PROTEIN-PROTEIN DOCKING VIA A DIFFERENTIABLE ENERGY-BASED MODEL" (ICLR 2024).
☆14Apr 24, 2024Updated 2 years ago
Alternatives and similar repositories for EBMDock
Users that are interested in EBMDock are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Official repository of "Multi-level Interaction Modeling for Protein Mutational Effect Prediction"☆11Jun 30, 2024Updated last year
- [ICLR 2024 Spotlight] The official repo for the paper "De novo Protein Design using Geometric Vector Field Networks".☆31Aug 23, 2024Updated last year
- SHA-3 Keccak sponge function implemented in Python☆11Oct 3, 2012Updated 13 years ago
- DrugGen: Advancing Drug Discovery with Large Language Models and Reinforcement Learning Feedback☆21May 22, 2025Updated 11 months ago
- Antibody structure prediction☆37Dec 16, 2025Updated 4 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- PyChem-Pro: a molecular viewer☆100Updated this week
- Code for ApoDock☆20Apr 7, 2025Updated last year
- p-IgGen: A Generative Paired Antibody Language Model☆13May 6, 2025Updated last year
- A 3D-equivariant neural network for protein structure accuracy estimation☆22Feb 24, 2023Updated 3 years ago
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆129Feb 26, 2025Updated last year
- Code of "Instruction Multi-Constraint Molecular Generation Using a Teacher-Student Large Language Model"☆14Jul 8, 2025Updated 10 months ago
- ☆13Apr 1, 2026Updated last month
- Molecular visualization for MDAnalysis with MolecularNodes in Blender☆18Mar 30, 2025Updated last year
- [Bioinformatics 2025] Official implementation of the paper "ParaSurf: A Surface-Based Deep Learning Approach for Paratope-Antigen Interac…☆29Jan 28, 2026Updated 3 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- The MULTICOM4 protein structure prediction system developed by the Bioinformatics and Machine Learning Lab at the University of Missouri …☆17Nov 27, 2025Updated 5 months ago
- Rotamer Density Estimator is an Unsupervised Learner of the Effect of Mutations on Protein-Protein Interaction (ICLR 2023)☆63Jun 17, 2024Updated last year
- http://spider.oscardhc.com☆12Jul 9, 2020Updated 5 years ago
- AIMNet2: Fast, accurate and transferable neural network interatomic potential☆18Oct 17, 2024Updated last year
- ☆11Feb 7, 2022Updated 4 years ago
- Implementation of the CVPR2025 paper LoTUS: Large-Scale Machine Unlearning with a Taste of Uncertainty.☆20Sep 10, 2025Updated 8 months ago
- Reinforcement Learning using PyTorch☆11Jan 18, 2024Updated 2 years ago
- Antibody Langauge Ensemble Fusion - fuses antibody structural ensemble and language representation for property prediction☆14Apr 23, 2024Updated 2 years ago
- ☆10Mar 18, 2020Updated 6 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Various Ideas for Protein Masked LM with ESMFold/ESM-2☆15Aug 17, 2023Updated 2 years ago
- Image Retrieval using Vision Transformers and FAISS☆21Nov 25, 2024Updated last year
- Implementation of DiffDock-PP: Rigid Protein-Protein Docking with Diffusion Models in PyTorch (ICLR 2023 - MLDD Workshop)☆235Dec 29, 2023Updated 2 years ago
- ☆19Jun 14, 2025Updated 10 months ago
- ChemPile project☆19Jul 31, 2025Updated 9 months ago
- DFMDock (Denoising Force Matching Dock), a diffusion model that unifies sampling and ranking within a single framework.☆54Jul 22, 2025Updated 9 months ago
- MobileViT Implementation in TensorFlow and Pytorch☆13Feb 6, 2026Updated 3 months ago
- Python rich client for visual protein Sequence to Structure Analysis☆19Mar 31, 2026Updated last month
- ☆16Oct 27, 2024Updated last year
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- [NeurIPS 2025] PRING: Rethinking Protein-Protein Interaction Prediciton from Pairs to Graphs☆20Oct 1, 2025Updated 7 months ago
- ☆23Jan 17, 2026Updated 3 months ago
- A Quasi-Wasserstein Loss for Learning Graph Neural Networks (QW loss)☆10May 20, 2024Updated last year
- PEER Benchmark, appear at NeurIPS 2022 Dataset and Benchmark Track (https://arxiv.org/abs/2206.02096)☆101Mar 18, 2023Updated 3 years ago
- The code for NeurIPS 2023 paper DSR☆14Oct 8, 2023Updated 2 years ago
- Learnable Global Pooling Layers Based on Regularized Optimal Transport (ROT)☆16Mar 17, 2024Updated 2 years ago
- DevDoctors - 의사를 위한 실전 AI☆13Jun 17, 2021Updated 4 years ago