krabberod / BIO9905MERG1_V21
BIO9905MERG1 – Bioinformatics for Environmental Sequencing (DNA metabarcoding)
☆10Updated last year
Alternatives and similar repositories for BIO9905MERG1_V21:
Users that are interested in BIO9905MERG1_V21 are comparing it to the libraries listed below
- Pairwise multilevel comparison using adonis☆72Updated last year
- Various functions for analysis of microbial community data☆43Updated 2 years ago
- Utilities for community ecology analysis☆18Updated 4 years ago
- ☆18Updated 5 years ago
- Normalized Stochasticity Ratio in community assembly☆25Updated 3 months ago
- Look Up Guild Information for Fungi in R☆19Updated last year
- MJOLNIR Metabarcoding Joining Obitools & Linkage Networks In R☆18Updated 7 months ago
- Pipeline to analyze eDNA metabarcoding samples (PE and SE, demultiplexed, multiplexed)☆12Updated 2 years ago
- Metabarcoding analyses pipeline - metaBarcoding and Environmental DNA Analysis Tool☆19Updated 5 years ago
- Infer Community Assembly Mechanisms by Phylogenetic bin-based null model analysis (Version 1)☆71Updated 3 weeks ago
- R package for downstream analysis for anacapa eDNA pipeline☆23Updated 3 years ago
- JAMP - Just Another Metabarcoding Pipeline☆32Updated 3 years ago
- metabaR is an R package to curate and visualise DNA metabarcoding data after basic bioinformatics analyses.☆14Updated 2 years ago
- Analysis code for a manuscript on community similarity computation☆14Updated 5 years ago
- Computer code for the manuscript "Climate Warming Enhances Microbial Network Complexity and Stability"☆45Updated 3 years ago
- ☆13Updated 3 years ago
- R scripts for performing co-occurrence analyses☆34Updated 10 years ago
- creating reference databases for amplicon sequencing☆30Updated 2 months ago
- Examples of application of comparative methods in R☆58Updated 2 years ago
- BioGeography with Bayesian (and likelihood) Evolutionary Analysis with R Scripts☆61Updated 3 months ago
- dada2 formatted nifH database☆11Updated 8 months ago
- Code for running analyses carried out in Stegen et al. 2013, ISME☆29Updated 6 years ago
- ☆22Updated 5 years ago
- LoD calculator☆20Updated 5 years ago
- A dynamic database of fungal trait measurements☆72Updated 4 years ago
- A web app for environmental DNA metabarcoding analysis☆10Updated 3 years ago
- FUNGuild: parsing OTUs into functional guilds☆108Updated 9 months ago
- Various customs functions written to enhance the base functions of phyloseq. Most of them are used in the formation "Métagénomique 16S" p…☆33Updated last year
- ggplot-based plots for vegan☆113Updated last year
- Tutorial for performing redundancy analysis☆15Updated 4 years ago