krabberod / BIO9905MERG1_V21
BIO9905MERG1 – Bioinformatics for Environmental Sequencing (DNA metabarcoding)
☆10Updated last year
Related projects: ⓘ
- Various functions for analysis of microbial community data☆41Updated last year
- Pairwise multilevel comparison using adonis☆67Updated last year
- Normalized Stochasticity Ratio in community assembly☆25Updated 2 years ago
- Utilities for community ecology analysis☆17Updated 3 years ago
- BioGeography with Bayesian (and likelihood) Evolutionary Analysis with R Scripts☆56Updated this week
- R package and web app for spatial visualisation of admixture on a projected map☆36Updated 2 months ago
- Species occurrence dot maps in R☆17Updated 2 years ago
- Infer Community Assembly Mechanisms by Phylogenetic bin-based null model analysis (Version 1)☆65Updated 7 months ago
- JAMP - Just Another Metabarcoding Pipeline☆32Updated 2 years ago
- MJOLNIR Metabarcoding Joining Obitools & Linkage Networks In R☆17Updated 2 months ago
- Analysis code for a manuscript on community similarity computation☆14Updated 5 years ago
- ☆16Updated 4 years ago
- Look Up Guild Information for Fungi in R☆17Updated 11 months ago
- R package for downstream analysis for anacapa eDNA pipeline☆22Updated 2 years ago
- Global Root Trait (GRooT) Database: Data & Code☆12Updated 4 years ago
- metabaR is an R package to curate and visualise DNA metabarcoding data after basic bioinformatics analyses.☆13Updated last year
- ☆13Updated 3 years ago
- Metabarcoding analyses pipeline - metaBarcoding and Environmental DNA Analysis Tool☆18Updated 5 years ago
- R scripts for performing co-occurrence analyses☆34Updated 9 years ago
- Pipeline to analyze eDNA metabarcoding samples (PE and SE, demultiplexed, multiplexed)☆10Updated 2 years ago
- Tutorial for performing redundancy analysis☆15Updated 3 years ago
- Various customs functions written to enhance the base functions of phyloseq. Most of them are used in the formation "Métagénomique 16S" p…☆33Updated 10 months ago
- dada2 formatted nifH database☆11Updated 4 months ago
- LoD calculator☆17Updated 5 years ago
- Examples of application of comparative methods in R☆57Updated last year
- ☆23Updated 2 years ago
- Computer code for the manuscript "Climate Warming Enhances Microbial Network Complexity and Stability"☆40Updated 2 years ago
- Code for running analyses carried out in Stegen et al. 2013, ISME☆29Updated 6 years ago
- TaxonTableTools - A comprehensive, platform-independent graphical user interface software to explore and visualise DNA metabarcoding data☆21Updated last year
- Welcome to the offical webpage for the R-package ‘humboldt’☆13Updated 9 months ago