Software for Quantifying Mitochondrial Content in Live Cells
☆30Jun 9, 2025Updated 9 months ago
Alternatives and similar repositories for MitoGraph
Users that are interested in MitoGraph are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- MiNA (Mitochondrial Network Analysis) is a project aimed at making the analysis and characterization of mitochondrial network morphology …☆32Feb 3, 2023Updated 3 years ago
- MiToBo - A microscope image analysis toolbox☆13Oct 14, 2025Updated 5 months ago
- Automated mitochondrial segmentation and tracking.☆34Sep 4, 2021Updated 4 years ago
- FiberApp is a software for tracking and analyzing biomacromolecules, polymers, filaments and fibrous objects☆13Jan 7, 2019Updated 7 years ago
- Nellie: Automated organelle segmentation, tracking, and hierarchical feature extraction in 2D/3D live-cell microscopy☆90Jan 14, 2026Updated 2 months ago
- ImageJ plugin detecting and colocalizing particles of given size (vesicles, dots, etc on biological microscopy images)☆19Jun 16, 2025Updated 9 months ago
- Mitochondria Analyzer☆25Dec 13, 2022Updated 3 years ago
- A set of Qt-based widgets onto the pymmcore-plus model☆20Updated this week
- GDSC Single Molecule Light Microscopy ImageJ Plugins☆17Feb 6, 2026Updated last month
- Winter Break Collaboratory DS Boot Camp during the academic year of 2017-2018☆14Feb 12, 2018Updated 8 years ago
- Deep Learning segmentation suite designed for 2D microscopy image segmentation☆10Dec 17, 2021Updated 4 years ago
- A zoo of implementations of differential equation problems in NumPy and JAX. Oscillators, chemical reactions, n-body problems, epidemiolo…☆17Dec 28, 2023Updated 2 years ago
- Designs for 3D printed parts that were developed in the Zhuang Lab.☆11Dec 2, 2020Updated 5 years ago
- quantixed FIJI update site☆17Jan 9, 2026Updated 2 months ago
- Analysis of TrackMate XML outputs in R☆17Mar 7, 2026Updated 2 weeks ago
- Modular, object-based analysis for ImageJ/Fiji☆16Updated this week
- TensorFlow Deconvolution for Microscopy Data☆91Apr 29, 2022Updated 3 years ago
- ijp-toolkit general purpose plugins for ImageJ (also known as ij-plugins_toolkit)☆17Mar 10, 2026Updated last week
- Label-free measurement of density and anisotropy from polarization-resolved images☆12Jun 4, 2023Updated 2 years ago
- FPGA Based GPS Synchronized Clock☆10May 7, 2021Updated 4 years ago
- This repository contains the installation zip file, user manual, example data, and source code for the PyXlinkViewer plugin for PyMOL v2☆10Jul 3, 2023Updated 2 years ago
- A Python package for single-cell spatial image analysis.☆18Aug 24, 2023Updated 2 years ago
- Analysis of smFISH data☆12Aug 27, 2018Updated 7 years ago
- clEsperanto - GPU-accelerated image processing across languages and platforms☆11Feb 13, 2021Updated 5 years ago
- Fiji/ImageJ macros to quickly add a scale bar to an (electron microscopy) image.☆13Apr 23, 2025Updated 11 months ago
- Napari Visualization tool for Trackmate > 6.0 XML files for 2/3D + time tracks. Available via pip package napatrackmater.☆18Oct 8, 2025Updated 5 months ago
- BlueBrain's recipe writer to parameterize structure and logic of a mouse whole-neocortex connectome☆10May 13, 2022Updated 3 years ago
- Detect morphological motifs, such as blebs, filopodia, and lamellipodia, from 3D images of surfaces, particularly images of cell surfaces…☆32Mar 12, 2026Updated last week
- CytoData 2016 – origin story☆18Sep 15, 2017Updated 8 years ago
- Munin data collection scripts (plugins) to monitor mikrotik devices☆11Jul 23, 2017Updated 8 years ago
- Pure python/C++ micro-manager ecosystem☆46Mar 13, 2026Updated last week
- A first intoduction to scripting in Fiji using the ImageJ Macro language.☆26Sep 26, 2024Updated last year
- ☆10Nov 29, 2024Updated last year
- A python package implements scTenifoldnet and scTenifoldknk☆51Oct 18, 2022Updated 3 years ago
- Visualization of fluorescent protein properties with d3.js☆13Jan 18, 2017Updated 9 years ago
- Binary releases of Vaa3D and related software components☆45Nov 11, 2023Updated 2 years ago
- Code repository for the SPIE book Optics Using Python☆21Feb 24, 2024Updated 2 years ago
- ImageJ macro for the analysis of foci (e.g. DNA damage) in nuclei/cells☆22Dec 9, 2025Updated 3 months ago
- Fiji's plugin for colocalization analysis☆28Feb 24, 2025Updated last year