TimothyStiles / how-to-synbioView external linksLinks
The resources I always recommend to new synthetic biologists.
☆83Sep 18, 2021Updated 4 years ago
Alternatives and similar repositories for how-to-synbio
Users that are interested in how-to-synbio are comparing it to the libraries listed below
Sorting:
- A Go package for engineering organisms.☆721Oct 21, 2024Updated last year
- Go REST API to replace Genbank, Uniprot, Rhea, and CHEMBL☆23Dec 12, 2023Updated 2 years ago
- A three part tutorial series on how to access all of the MOOCs, books, and scientific papers.☆41Sep 16, 2022Updated 3 years ago
- Read DNA sequences from colourful Microsoft Word documents☆34May 12, 2025Updated 9 months ago
- Computer-Aided Process Planner (CAPP) for Synthetic Biology Research☆11Jun 1, 2021Updated 4 years ago
- repository-based plasmid design☆31Nov 28, 2022Updated 3 years ago
- Core library and basic plug-ins for the Amyris Genotype Specification Language (GSL) compiler.☆23Apr 5, 2023Updated 2 years ago
- 🤖 Python biolab automation library: parsers, report generators, picklist simulators, and more☆46May 29, 2025Updated 8 months ago
- Metal and Water prediction☆13Feb 5, 2025Updated last year
- Sequencing analysis pipeline☆15Dec 12, 2025Updated 2 months ago
- a JavaScript DNA, RNA, and protein sequence viewer☆302Jan 21, 2026Updated 3 weeks ago
- ☆12Oct 15, 2024Updated last year
- Scripts to perform active learning as described in the referenced article.☆13Sep 17, 2025Updated 4 months ago
- General low-level API☆50Jul 18, 2022Updated 3 years ago
- Toolkit for Modelling and Simulation of Gene Expressions and Metabolism☆13Jan 9, 2026Updated last month
- A versatile DNA sequence optimizer☆262Nov 5, 2025Updated 3 months ago
- BioSCRAPE (Bio-circuit Stochastic Single-cell Reaction Analysis and Parameter Estimation)☆29Mar 29, 2025Updated 10 months ago
- Ginkgo SARS-CoV-2 synthesis efforts: overviews and data☆13Jun 7, 2020Updated 5 years ago
- cameo - computer aided metabolic engineering & optimization☆124Nov 7, 2022Updated 3 years ago
- Webserver and command line tool for annotating engineered plasmids☆137Jul 15, 2025Updated 6 months ago
- Python library for primer-based verification of DNA assemblies: primer selection, data analyis, etc.☆33Apr 9, 2025Updated 10 months ago
- overlapping bases in read-pairs from a fragment indicate accuracy and reveal error-prone sites☆34Jun 6, 2025Updated 8 months ago
- Short overhangs design for DNA assembly☆15Jun 8, 2022Updated 3 years ago
- Coral, a library and framework for specifying synthetic biology design processes.☆34Dec 26, 2022Updated 3 years ago
- An amino acid sequence annotator☆17May 15, 2025Updated 8 months ago
- Openlab - decentralised bioinformatics services - from the command line.☆20Mar 1, 2023Updated 2 years ago
- Laboratory Open Protocol (LabOP) Language☆45Oct 7, 2024Updated last year
- Material for CULS frontend course☆18Dec 10, 2019Updated 6 years ago
- In silico protein surgery using ESM.☆18Mar 12, 2024Updated last year
- Web based Registry platform for managing synthetic biological parts☆42May 16, 2024Updated last year
- Efficiently keep track of changes to genomes☆38Jul 22, 2024Updated last year
- Genetic circuit design automation☆854Sep 19, 2022Updated 3 years ago
- Genomic variant analysis platform☆45Jan 26, 2026Updated 2 weeks ago
- Template for building your own portfolio☆27Jul 2, 2025Updated 7 months ago
- Just some light reading.☆21Jan 22, 2020Updated 6 years ago
- A Rust library for parsing, writing and manipulating Genbank sequence files☆21Apr 20, 2025Updated 9 months ago
- Interactive, particle-based physics, chemistry and biology modeling and simulation environment☆25Jul 14, 2025Updated 7 months ago
- Efficient, parallel compression for terabyte-scale data☆58Sep 27, 2025Updated 4 months ago
- GENtle2 - Web-Based DNA Editor for Synthetic Biology☆104Feb 16, 2019Updated 6 years ago