Alternatives and similar repositories for platechain

Users that are interested in platechain are comparing it to the libraries listed below

• jordisr / cellscape
  Vector graphics cartoons from protein structure
  ☆56Updated 3 years ago
• nf-core / proteinfold
  Protein 3D structure prediction pipeline
  ☆89Updated this week
• multimeric / Unipressed
  Comprehensive Python client for the Uniprot REST API
  ☆52Updated last month
• yachielab / QUEEN
  QUEEN: a framework to generate quinable and efficiently editable nucleotide sequence resources
  ☆45Updated this week
• DennisGankin / species-aware-DNA-LM
  Species-aware DNA language modeling
  ☆18Updated 2 years ago
• hgbrian / biocolabs
  a collection of colabs useful for molecular biology
  ☆31Updated last year
• brianhie / evolocity
  Evolutionary velocity with protein language models
  ☆94Updated 2 years ago
• modernatx / seqlike
  Unified biological sequence manipulation in Python
  ☆207Updated last year
• hiyama341 / teemi
  teemi: A Python package for reproducible and FAIR microbial strain construction. Simulate the entire dbtl-cycle, generate genetic parts, …
  ☆42Updated last week
• Lattice-Automation / icor-codon-optimization
  RNN-based Codon Optimization Tool. Publication: https://doi.org/10.1186/s12859-023-05246-8
  ☆69Updated 2 years ago
• soedinglab / MMseqs2-App
  MMseqs2 app to run on your workstation or servers
  ☆97Updated 3 weeks ago
• r2dt-bio / R2DT
  Visualise RNA secondary structure in consistent, reproducible and recognisable layouts
  ☆76Updated 3 months ago
• Genentech / beignet
  A standard library for biological research.
  ☆29Updated 2 months ago
• hgbrian / biomodals
  bioinformatics tools running on modal
  ☆107Updated 2 weeks ago
• ViennaRNA / forna
  Create force-directed graphs of RNA secondary structures.
  ☆109Updated 5 years ago
• adaptyvbio / automancer
  Automancer is a software application that enables researchers to design, automate, and manage their experiments.
  ☆24Updated 2 years ago
• eternagame / EternaFold
  Improving RNA structure prediction through multitask learning on diverse crowdsourced data.
  ☆62Updated last year
• Arcadia-Science / ProteinCartography
  A pipeline to build similarity maps of protein space
  ☆40Updated last month
• ViennaRNA / forgi
  An RNA manipulation library.
  ☆56Updated last year
• KarchinLab / bigmhc
  BigMHC predicts MHC-I (neo)epitope presentation and immunogenicity
  ☆56Updated last year
• Edinburgh-Genome-Foundry / DnaCauldron
  Simple cloning simulator (Golden Gate etc.) for single and combinatorial assemblies
  ☆62Updated 6 months ago
• martinez-zacharya / TRILL
  Sandbox for Deep-Learning based Computational Protein Design
  ☆117Updated last month
• eternagame / draw_rna
  Draw RNA secondary structures in python.
  ☆49Updated 4 months ago
• ProteomicsML / ProteomicsML
  Community-curated tutorials and datasets for ML in proteomics
  ☆55Updated 3 weeks ago
• nebiolabs / plate-map
  A flexible tool for defining the contents of 96 well plates.
  ☆50Updated last year
• helicalAI / helical
  A framework for state-of-the-art pre-trained bio foundation models on genomics and transcriptomics modalities.
  ☆166Updated this week
• sacdallago / biotrainer
  Biological prediction models made simple.
  ☆46Updated 3 weeks ago
• Sanofi-Public / CodonBERT
  Repository for mRNA Paper and CodonBERT publication.
  ☆134Updated last year
• fhalab / evSeq
  Computational tools for extremely low-cost, massively parallel amplicon-based sequencing of every variant in protein mutant libraries.
  ☆34Updated 3 years ago
• dgretton / pyhamilton
  Python for Hamilton liquid handling robots
  ☆174Updated last month