tikz / bio
Go library for parsing biological data formats and tool outputs from UniProt, PDB (Structure/Model/Chain/Residue/Atom - SMCRA), Pfam, DSSP, Fpocket and more. Plus: comparable position mappings!
☆11Updated 2 years ago
Related projects ⓘ
Alternatives and complementary repositories for bio
- The database and API backend for ZincBind - the database of zinc binding sites☆15Updated 3 years ago
- The molstar plugin for plotly dash framework☆15Updated 2 weeks ago
- Generates images from mmCIF/BCIF files☆35Updated last month
- Python package to manage protein structures and their annotations☆40Updated 9 months ago
- A bare metal Python library for building and manipulating protein molecular structures☆16Updated last month
- A multiple sequence alignment viewer☆18Updated 2 weeks ago
- Web-tool for calculating and visualizing hydrophobic protrusions☆10Updated 2 years ago
- an integrated tool for molecular docking and virtual screening☆55Updated 2 months ago
- localCIDER - sequence analysis tool for disordered protein sequences☆22Updated last year
- Protein Sequence Design with Deep Learning and Tooling like Monte Carlo Sampling and Analysis☆50Updated 3 weeks ago
- Web cards/apps describing peptides☆23Updated last year
- Script to facilitate the making of horizontal scripts☆15Updated 5 months ago
- Code used in the manuscript for De Novo Design of Bioactive Protein Switches☆15Updated 5 years ago
- The central entry point to the P2Rank project with links to the individual projects, including references to documentation, datasets, etc…☆10Updated last year
- Source code and examples for AlphaFold Unmasked☆41Updated this week
- Automancer is a software application that enables researchers to design, automate, and manage their experiments.☆19Updated last year
- Rapid generation of high-quality structure figures for publication with PyMOL-PUB☆66Updated 3 weeks ago
- This repo contains the results data for Adaptyv Bio’s EGFR Protein Design Competition.☆28Updated 3 weeks ago
- StarGazer is a tool designed for rapidly assessing drug repositioning opportunities. It combines multi-source, multi-omics data with a no…☆32Updated last year
- ☆27Updated 6 months ago
- Kincore-Standalone2 - Python3 code for calculating the conformational state of typical protein kinases☆9Updated last year
- Rendering protein mutation movies from predicted 3D structures☆20Updated 11 months ago
- Printing text using protein structures☆12Updated 3 years ago
- A conda-smithy repository for ambertools.☆10Updated 2 weeks ago
- ☆11Updated 5 months ago
- PyMOL-wasm port's binary and html/javascript code☆17Updated last year
- ☆14Updated 3 months ago
- a collection of colabs useful for molecular biology☆27Updated 8 months ago
- ☆15Updated last year
- CodonBert: a BERT-based architecture tailored for codon optimization using the cross-attention mechanism.☆33Updated 2 months ago