labdao / openlab-cliLinks
Openlab - decentralised bioinformatics services - from the command line.
☆20Updated 2 years ago
Alternatives and similar repositories for openlab-cli
Users that are interested in openlab-cli are comparing it to the libraries listed below
Sorting:
- MetaSRA: normalized sample-specific metadata for the Sequence Read Archive☆45Updated 2 months ago
- ☆12Updated last year
- Clonal reconstruction from HTS data☆10Updated 4 years ago
- SmallSeqFlow: A streamlined, notebook-based bulk RNA-seq analysis pipeline optimized for small-sample studies with modular extensions.☆16Updated 11 months ago
- A software tool for personalized and allele-specific CRISPR editing.☆18Updated 4 years ago
- Learning resources originally for a class held December 2020 "Dry bench skills for Researchers". Expanding based upon mini-courses.☆11Updated 4 years ago
- GOMCL: a toolkit to cluster, evaluate, and extract non-redundant associations of Gene Ontology-based functions☆22Updated 2 years ago
- PRSKB is a website and command-line interface tool for calculating polygenic risk scores using GWA studies from the NHGRI-EBI Catalog.☆30Updated last year
- Python-based preprocessing software for Illumina methylation arrays☆42Updated 2 years ago
- repository-based plasmid design☆29Updated 3 years ago
- SPROUT is a machine learning tool to predict the DNA repair outcome in CRISPR experiments.☆15Updated 4 years ago
- Utilities for analyzing mutations and neoepitopes in patient cohorts☆20Updated 7 years ago
- Efficiently keep track of changes to genomes☆38Updated last year
- Clair3-Trio: variant calling in trio using Nanopore long-reads☆16Updated last year
- Code for the CRISPOR article, all data and code to create figures and analysis☆47Updated 9 years ago
- ☆35Updated 3 years ago
- Exposing public genomics data via computable and searchable metadata☆13Updated last year
- MuSiCa - Mutational Signatures in Cancer☆23Updated 2 years ago
- Library for indexing VCF files for random access searches by rsID☆17Updated 6 months ago
- programs and scripts, mainly python, for analyses related to nucleic or protein sequences☆24Updated 2 months ago
- Align sequences and then parse features.☆17Updated 3 months ago
- ☆26Updated 5 years ago
- API providing access to papers and authors scraped from biorxiv.org☆56Updated 2 years ago
- pathoscore evaluates variant pathogenicity tools and scores.☆22Updated 3 years ago
- PAnno is a Pharmacogenomics Annotation tool for clinical genomic testing.☆16Updated 3 years ago
- Bioinformatics for Benched Biologists☆22Updated 5 years ago
- biotoolsregistry: discovery portal for bioinformatics☆82Updated 2 weeks ago
- Exercises for training scientists to perform some RNA-seq analyses.☆11Updated 6 years ago
- Namespace encoding hierarchical relationships between proteins, protein families, and protein complexes.☆12Updated 4 years ago
- 3D Genome Browser☆32Updated 4 years ago