PennLINC / xcpEngine
Official public repository for the XCP Engine. This tool is deprecated in favor of XCP-D and ASLPrep.
☆66Updated last year
Related projects: ⓘ
- Nuisance removal tool for fMRI data☆53Updated 6 months ago
- multi atlas transfer tools for neuroimaging (maTT)☆57Updated 2 years ago
- A BIDS App for minimal preprocessing using the HCP Pipelines☆33Updated 4 months ago
- Easy creation of Lausanne2008 atlases☆24Updated 4 years ago
- ☆95Updated 10 months ago
- Tools for mesh surface-based operations☆34Updated 5 years ago
- ☆84Updated 7 years ago
- Probabilistic Threshold-Free Cluster Enhancement of Neuroimages☆38Updated last year
- Congrads is a data-driven method for mapping the spatial organisation of connectivity within a pre-defined region-of-interest (i.e. conne…☆35Updated 6 years ago
- Post-processing of fMRIPrep, NiBabies, and HCP outputs☆74Updated this week
- This is the repository for the JuSpace toolbox allowing for cross-modal correlations between imaging data and positron emission tomograph…☆39Updated last month
- Fit Linear Models to BIDS Datasets☆73Updated 5 months ago
- Reproducible and Programmatic Human Neuroimaging Visualisations☆72Updated last year
- Generate subject connectomes from raw BIDS data & perform inter-subject connection density normalisation, using the MRtrix3 software pac…☆49Updated 11 months ago
- Python interface for generating coordinate tables and region labels from statistical MRI images☆88Updated last month
- MATLAB code for reading and writing CIFTI connectivity files☆65Updated last week
- For selectively downloading ABCD data QC'ed as good by the DAIC, converting it to BIDS standard input data, selecting the best pair of sp…☆19Updated 2 weeks ago
- A statistics and context decoding toolbox for neuroimaging.☆91Updated 9 months ago
- BIDS app wrapping recon-all from FreeSurfer☆40Updated 4 months ago
- A repo for tools to aggregate public MRIQC data (Neurohackademy 2019)☆26Updated 4 years ago
- The tools of the Human Connectome Project (HCP) adapted for working with non-HCP datasets☆111Updated last year
- Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data☆72Updated 3 years ago
- The Midnight Scanning Club Codebase☆27Updated 5 years ago
- fmriflows is a consortium of many (dependent) fMRI analysis pipelines, including anatomical and functional pre-processing, univariate 1st…☆60Updated 2 years ago
- Tool for automatic denoising, denoising strategies comparison, and functional connectivity data quality control.☆47Updated last year
- bids application for processing functional MRI data, robust to scanner, acquisition and age variability.☆49Updated 3 weeks ago
- Utility functions for working with DICOM and BIDS neuroimaging data☆61Updated last month
- Open Scripts and pipelines from the Multimodal Imaging and Connectome Analysis Lab at the Montreal Neurological Institute☆72Updated this week
- ComBat Family of Harmonization Methods☆14Updated this week
- This toolbox includes MATLAB scripts to perform a "spin test" of anatomical correspondence between cortical surface maps, as presented in…☆44Updated 4 years ago