ReproNim / containersLinks
Containers "distribution" for reproducible neuroimaging
☆29Updated last week
Alternatives and similar repositories for containers
Users that are interested in containers are comparing it to the libraries listed below
Sorting:
- A setup for automatic generation of shareable, version-controlled BIDS datasets from MR scanners☆49Updated 6 months ago
- Nipype implementation of BetaSeries Correlations (Beta)☆34Updated 2 years ago
- Fit Linear Models to BIDS Datasets☆77Updated 2 weeks ago
- This repository contains all code for the BLMM toolbox.☆20Updated last year
- A package for publication-ready brain surface figures☆67Updated 3 weeks ago
- Curation of BIDS (CuBIDS): A sanity-preserving software package for processing BIDS datasets.☆28Updated 2 weeks ago
- Tool to convert raw MRI datasets to BIDS-compatible datasets☆35Updated 3 years ago
- Tool for automatic denoising, denoising strategies comparison, and functional connectivity data quality control.☆48Updated 2 years ago
- a BIDS app for pseudo-anonymization of neuroimaging data☆52Updated last month
- Resting state HRF estimation from BOLD-fMRI signal☆39Updated 4 months ago
- Python3 library to format physiological files in BIDS. At the moment, it supports Acqknowledge and Labchart. BrainHack participants, chec…☆66Updated 3 weeks ago
- rsHRF: A Toolbox for Resting State HRF Deconvolution and Connectivity Analysis (MATLAB)☆54Updated 2 months ago
- A neuroscience library for Python, intended to complement the existing nibabel library.☆127Updated last month
- Nuisance removal tool for fMRI data☆57Updated last year
- Python implementation of Wu et al (2018)'s registration fusion☆27Updated 4 years ago
- Because we all need pointers when it comes to make our code better.☆17Updated 3 months ago
- Official public repository for the XCP Engine. This tool is deprecated in favor of XCP-D and ASLPrep.☆65Updated 2 years ago
- bids application for processing functional MRI data, robust to scanner, acquisition and age variability.☆57Updated 2 months ago
- Working repository to turn the COBIDAS guidelines to report methods and results in neuroimaging into a user friendly checklist☆39Updated last week
- Bootstrapped Analysis of Stable Clusters- A semi-automated fMRI individual and group level functional parcellation technique☆26Updated 6 years ago
- JuBrain Anatomy Toolbox☆22Updated 6 years ago
- Probabilistic Threshold-Free Cluster Enhancement of Neuroimages☆41Updated 2 years ago
- Scripts for comparing different fmriprep denoising approaches on quality control functional connectivity (QC-FC) motion, QC-FC distance-d…☆15Updated 4 years ago
- Useful tools from the Network Neuroscience Lab☆87Updated 2 months ago
- Generate and run SLURM jobs on HPCs☆12Updated 3 months ago
- A pythonic 3D viewer to visualize and plot brains and neuroimaging data☆36Updated last year
- Python-based Reliability in MRI: Calculating Group level and Individual Level Similarity between runs and sessions.☆37Updated 2 months ago
- Beginner's guide for Nipype☆37Updated 2 years ago
- A VM setup for use in fMRI analysis and education☆57Updated last year
- MOVED TO https://github.com/nipreps/dmriprep☆17Updated 2 years ago