Alternatives and similar repositories for containers

Users that are interested in containers are comparing it to the libraries listed below

• ReproNim / reproin
  A setup for automatic generation of shareable, version-controlled BIDS datasets from MR scanners
  ☆52Updated 8 months ago
• ohbm / eCobidas
  Working repository to turn the COBIDAS guidelines to report methods and results in neuroimaging into a user friendly checklist
  ☆40Updated last week
• HBClab / NiBetaSeries
  Nipype implementation of BetaSeries Correlations (Beta)
  ☆35Updated 2 years ago
• PennLINC / CuBIDS
  Curation of BIDS (CuBIDS): A sanity-preserving software package for processing BIDS datasets.
  ☆29Updated 2 weeks ago
• poldracklab / fitlins
  Fit Linear Models to BIDS Datasets
  ☆78Updated last month
• incf-nidash / PyNIDM
  ☆21Updated 3 weeks ago
• nipy / dmriprep
  MOVED TO https://github.com/nipreps/dmriprep
  ☆17Updated 3 years ago
• psychoinformatics-de / fairly-big-processing-workflow
  A template for decentralized, reproducible processing
  ☆16Updated last year
• SIMEXP / fmriprep-slurm
  Generate and run SLURM jobs on HPCs
  ☆12Updated 5 months ago
• TomMaullin / BLMM
  This repository contains all code for the BLMM toolbox.
  ☆20Updated 2 years ago
• bids-apps / rsHRF
  Resting state HRF estimation from BOLD-fMRI signal
  ☆39Updated 6 months ago
• incf-nidash / nidm-specs
  Neuroimaging Data Model (NIDM): describing neuroimaging data and provenance
  ☆33Updated 2 years ago
• Remi-Gau / check_my_code
  Because we all need pointers when it comes to make our code better.
  ☆17Updated 5 months ago
• noahbenson / neuropythy
  A neuroscience library for Python, intended to complement the existing nibabel library.
  ☆127Updated 3 months ago
• danjgale / reg-fusion
  Python implementation of Wu et al (2018)'s registration fusion
  ☆27Updated 4 years ago
• danjgale / surfplot
  A package for publication-ready brain surface figures
  ☆70Updated 2 months ago
• DCAN-Labs / abcd-hcp-pipeline
  bids application for processing functional MRI data, robust to scanner, acquisition and age variability.
  ☆57Updated 3 weeks ago
• NILAB-UvA / bidsify
  Tool to convert raw MRI datasets to BIDS-compatible datasets
  ☆35Updated 3 years ago
• transatlantic-comppsych / fmriprep_qa_guide
  Rough draft of a guide for reviewing fmriprep's QA outputs
  ☆34Updated 3 years ago
• PeerHerholz / BIDSonym
  a BIDS app for pseudo-anonymization of neuroimaging data
  ☆53Updated 3 months ago
• ohbm / hackathon2021
  Website for the 2021 OHBM Hackathon
  ☆22Updated 3 years ago
• inm7 / jubrain-anatomy-toolbox
  JuBrain Anatomy Toolbox
  ☆22Updated 6 years ago
• sjburwell / fmriprep_denoising
  Scripts for comparing different fmriprep denoising approaches on quality control functional connectivity (QC-FC) motion, QC-FC distance-d…
  ☆15Updated 4 years ago
• iamdamion / HCP-snippets
  Simple and brief walkthroughs to help grad students/new users complete basic tasks with workbench command and common HCP pipeline output …
  ☆16Updated 4 years ago
• neuropycon / ephypype
  Neuropycon package of functions for electrophysiology analysis, can be used from graphpype and nipype
  ☆28Updated 6 months ago
• poldrack / fmri-analysis-vm
  A VM setup for use in fMRI analysis and education
  ☆58Updated last year
• elizabethbeard / mriqception
  A repo for tools to aggregate public MRIQC data (Neurohackademy 2019)
  ☆27Updated 5 years ago
• con / open-brain-consent
  Making neuroimaging open from the grounds (consent form) and up (tools)
  ☆45Updated 3 weeks ago
• ColeLab / ActflowToolbox
  The Brain Activity Flow ("Actflow") Toolbox. Tools to quantify the relationship between connectivity and task activity through network si…
  ☆46Updated 10 months ago
• spinicist / nanslice
  A Python implementation of 'dual-coding'
  ☆42Updated last year