Alternatives and similar repositories for multiBrain

Users that are interested in multiBrain are comparing it to the libraries listed below

• nipreps / dmriprep
  dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…
  ☆73Updated last month
• nipreps / niworkflows
  Common workflows for MRI (anatomical, functional, diffusion, etc)
  ☆106Updated this week
• nighres / nighres
  Processing tools for high-resolution neuroimaging
  ☆73Updated last week
• nipreps / smriprep
  Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)
  ☆159Updated this week
• PennLINC / qsiprep
  Preprocessing of diffusion MRI
  ☆169Updated this week
• miykael / nipype_tutorial
  Learn Nipype with these tutorial notebooks - go here to see them online -->
  ☆127Updated last year
• raamana / visualqc
  VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.
  ☆74Updated 5 months ago
• Qoala-T / QC
  Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data
  ☆78Updated 4 years ago
• neurospin / pypreprocess
  Preprocessing scripts for neuro imaging
  ☆110Updated 2 years ago
• bids-apps / freesurfer
  BIDS app wrapping recon-all from FreeSurfer
  ☆43Updated 2 months ago
• scilus / scilpy
  The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox
  ☆83Updated last week
• predictive-clinical-neuroscience / braincharts
  ☆39Updated 5 months ago
• Deep-MI / fsqc
  A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data
  ☆67Updated 3 weeks ago
• scilus / tractoflow
  TractoFlow: A robust, efficient and reproducible diffusion MRI pipeline leveraging Nextflow & Singularity
  ☆61Updated last year
• rpomponio / neuroHarmonize
  Harmonization tools for multi-site neuroimaging analysis. Implemented as a python package. Harmonization of MRI, sMRI, dMRI, fMRI variabl…
  ☆114Updated this week
• HALFpipe / HALFpipe
  ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data
  ☆106Updated this week
• templateflow / templateflow
  The TemplateFlow Archive - A DataLad super-dataset
  ☆93Updated last month
• daducci / COMMIT
  Linear framework to combine tractography and tissue microstructure estimation with diffusion MRI
  ☆47Updated last week
• HumanBrainED / NHP-BrainExtraction
  ☆39Updated 3 years ago
• MASILab / PreQual
  An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images
  ☆53Updated last year
• CoBrALab / RABIES
  fMRI preprocessing pipeline and analysis tools adapted for rodent images. Visit the full documentation at https://rabies.readthedocs.io/
  ☆48Updated last week
• andy1764 / CovBat_Harmonization
  Correcting Covariance Batch Effects (CovBat): Harmonization of mean and covariance for multi-site data
  ☆26Updated 2 years ago
• bids-apps / HCPPipelines
  A BIDS App for minimal preprocessing using the HCP Pipelines
  ☆37Updated 2 months ago
• PennLINC / aslprep
  Preprocessing of arterial spin labeling (ASL) data
  ☆53Updated this week
• pBFSLab / DeepPrep
  DeepPrep: An accelerated, scalable, and robust pipeline for neuroimaging preprocessing empowered by deep learning
  ☆106Updated 2 months ago
• MICA-MNI / micapipe
  micapipe from the Multimodal imaging and connectome analysis lab (http://mica-mni.github.io) at the Montreal Neurological Institute. Read…
  ☆114Updated last week
• rordenlab / niimath
  niimath - a clone of fslmaths. Try the live demo:
  ☆71Updated last month
• NeuroanatomyAndConnectivity / surfdist
  For calculating exact geodesic distances on cortical surface meshes
  ☆53Updated last year
• FCP-INDI / C-PAC
  Configurable Pipeline for the Analysis of Connectomes
  ☆76Updated last month
• neurodata / neuroparc
  ☆205Updated 2 years ago