monarch-initiative / phenomics-assistant
LLM retrieval augmented generation agent for the Monarch Knowledge graph.
☆20Updated this week
Alternatives and similar repositories for phenomics-assistant:
Users that are interested in phenomics-assistant are comparing it to the libraries listed below
- Data ingest application for Monarch Initiative knowledge graph using Koza☆15Updated this week
- Standardized identifiers and OWL classes for chromosomes and chromosomal parts across species☆13Updated 5 months ago
- Data transformation framework for LinkML data models☆48Updated this week
- First pass at a thin wrapper around the Monarch API and ChatGPT plugin☆13Updated 2 months ago
- A package to transform all OBO ontologies into KGX TSV format and OBO json, and put the transformed graph in KGhub☆32Updated 9 months ago
- Network Embedding All the Things☆18Updated 2 years ago
- source files for OBA (Ontology of Biological Attributes)☆27Updated this week
- CRDC-H model in LinkML, developed by the Center for Cancer Data Harmonization (CCDH)☆16Updated 3 years ago
- Medical action ontology☆54Updated 3 weeks ago
- Bayesian OWL ontology merging☆28Updated 5 months ago
- Version 4 of the EMBL-EBI Ontology Lookup Service (OLS)☆51Updated this week
- Build for NCBITaxon☆27Updated last month
- Integrated OBO ontology store☆44Updated 2 months ago
- Summary Dashboard for Open Biological and Biomedical Ontologies☆21Updated last month
- Utility for working with DOSDP design patterns and OWL ontologies☆27Updated 5 months ago
- Python toolkit for SSSOM mapping format☆49Updated this week
- OBO Library edition of NCIt☆23Updated 8 months ago
- A framework for empirical evaluation of phenotype matching and prioritisation☆12Updated this week
- Modular environmental exposures ontology☆32Updated 10 months ago
- PATO - the Phenotype And Trait Ontology☆58Updated 2 weeks ago
- Repo to organise the mouse-human phenotype mapping initiative and reconcile resources.☆13Updated this week
- Tools for working with KGCL☆15Updated last month
- Collections of GA4GH phenopackets that represent individuals with Mendelian diseases.☆19Updated this week
- National Microbiome Data Collaborative (NMDC) unified data model☆27Updated this week
- Ontology for representing scientific evidence and provenance information☆50Updated 5 months ago
- ☆14Updated this week
- 🗺️ Community curated and predicted equivalences and related mappings between named biological entities that are not available from prima…☆51Updated this week
- Java library to map LOINC-encoded test results to Human Phenotype Ontology☆30Updated last year
- The Unified Phenotype Ontology (uPheno) integrates multiple phenotype ontologies into a unified cross-species phenotype ontology.☆78Updated last week
- An experimental ontology containing key terms from Open Biological and Biomedical Ontologies (OBO)☆39Updated last month