obophenotype / cell-ontology
An ontology of cell types
☆168Updated this week
Alternatives and similar repositories for cell-ontology:
Users that are interested in cell-ontology are comparing it to the libraries listed below
- An ontology of gross anatomy covering metazoa. Works in concert with https://github.com/obophenotype/cell-ontology☆138Updated this week
- Github repo for the Experimental Factor Ontology (EFO)☆57Updated this week
- Schema and generated objects for biolink data model and upper ontology☆192Updated last week
- The Unified Phenotype Ontology (uPheno) integrates multiple phenotype ontologies into a unified cross-species phenotype ontology.☆79Updated last month
- 🗺️ Community curated and predicted equivalences and related mappings between named biological entities that are not available from prima…☆52Updated 3 weeks ago
- Provided files are a partial extraction of the Orphanet knowledge base on Rare Diseases☆48Updated 4 months ago
- A system for managing OBO PURLs☆80Updated last week
- Functional Associations using Variational Autoencoders☆39Updated 2 months ago
- Mondo Disease Ontology☆248Updated this week
- Communitiy-based Cell Line Ontology☆18Updated 9 months ago
- A Tool to Annotate and Prioritize Exome Variants☆210Updated 3 weeks ago
- A package to transform all OBO ontologies into KGX TSV format and OBO json, and put the transformed graph in KGhub☆32Updated last year
- Python module for prior knowledge integration. Builds databases of signaling pathways, enzyme-substrate interactions, complexes, annotat…☆139Updated last week
- This repo is for the metadata schemas associated with the HCA☆67Updated last week
- A collection of metadata, tools, and files associated with the Gene Ontology public web presence.☆46Updated this week
- 📮 An integrative registry of biological databases, ontologies, and nomenclatures.☆129Updated this week
- source files for OBA (Ontology of Biological Attributes)☆27Updated this week
- PATO - the Phenotype And Trait Ontology☆59Updated this week
- Collections of GA4GH phenopackets that represent individuals with Mendelian diseases.☆24Updated last month
- Repository for the GA4GH phenopacket schema☆85Updated 6 months ago
- RO is an ontology of relations for use with biological ontologies☆95Updated last week
- CellO: Gene expression-based hierarchical cell type classification using the Cell Ontology☆65Updated last year
- Repo to organise the mouse-human phenotype mapping initiative and reconcile resources.☆13Updated 3 months ago
- This repository hosts the tracker for issues pertaining to GO annotations.☆38Updated this week
- GeneWalk identifies relevant gene functions for a biological context using network representation learning☆130Updated 8 months ago
- Tutorials, workflows, and convenience scripts for Single Cell Portal☆50Updated last year
- OBO-formatted ontologies → networkx (Python 3)☆137Updated 2 weeks ago
- An app and library for building, conversion, and validation of GA4GH Phenopackets.☆13Updated last year
- ☆14Updated last week
- python library for working with ontologies and ontology associations☆128Updated 2 months ago