Profluent-AI / protein2pamLinks
Deep learning prediction of CRISPR-Cas PAM specificity
☆11Updated 6 months ago
Alternatives and similar repositories for protein2pam
Users that are interested in protein2pam are comparing it to the libraries listed below
Sorting:
- A tool for protein and protein complex structure prediction.☆29Updated last month
- Fast indexing and search of discontinuous motifs in protein structures☆62Updated last week
- A domain parser for Alphafold models☆39Updated last year
- ColabFold protocol☆52Updated 9 months ago
- PLMSearch enables accurate and fast homologous protein search with only sequences as input☆73Updated 7 months ago
- ☆31Updated 3 years ago
- Detection of remote homology by comparison of protein language model representations☆54Updated 7 months ago
- ☆68Updated 10 months ago
- GTalign, high-performance protein structure alignment, superposition and search☆48Updated this week
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆90Updated last year
- Geometric deep learning of protein–DNA binding specificity☆76Updated 4 months ago
- Protein language model trained on coding DNA☆47Updated 9 months ago
- Fast protein structure searching or your money back☆109Updated 4 months ago
- MMseqs2 app to run on your workstation or servers☆90Updated last week
- DeepAlign: the protein structure analysis toolkit☆40Updated 5 years ago
- Learning the language of protein-protein interactions☆85Updated 3 weeks ago
- PLMAlign utilizes per-residue embeddings as input to obtain specific alignments and more refined similarity☆20Updated 7 months ago
- OMEGA code described in "Scalable and cost-efficient custom gene library assembly from oligopools."☆33Updated last month
- Universal Structure Alignment of Monomeric and Complex Structure of Nucleic Acids and Proteins☆154Updated 3 months ago
- PLM based active learning model for protein engineering☆82Updated last year
- ☆51Updated this week
- TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.☆59Updated last year
- ☆30Updated last year
- AlphaFill is an algorithm based on sequence and structure similarity that “transplants” missing compounds to the AlphaFold models. By add…☆101Updated 3 months ago
- Toolkit for alphafold3 input and output files☆81Updated this week
- Fast protein domain structure embedding+search tool☆25Updated 2 months ago
- Fast and accurate protein domain segmentation using Invariant Point Attention☆40Updated 2 months ago
- Multiple Protein Structure Alignment at Scale with FoldMason☆184Updated last week
- A NumPy port of the foldseek code for encoding protein structures to 3di.☆65Updated 5 months ago
- Code repository of "Deep generative design of RNA family sequences"☆35Updated last year