NicoKiaru / LimeSeg
Point based 3D segmentation plugin for FIJI
☆9Updated last year
Alternatives and similar repositories for LimeSeg
Users that are interested in LimeSeg are comparing it to the libraries listed below
Sorting:
- Dataset EXploration & Processing☆32Updated 2 years ago
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets☆26Updated 2 months ago
- Optimize image processing workflows in napari☆17Updated last week
- Napari plugin for custom analysis and visualization of lattice lightsheet and Oblique Plane Microscopy data. The plugin is optimized for …☆13Updated 2 weeks ago
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆26Updated last week
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆64Updated last week
- Little OBjects Segmentation and Tracking EnviRonment☆9Updated 4 years ago
- ☆12Updated last year
- Napari gaming☆17Updated 3 years ago
- A package for processing diSPIM images with GPU implementation☆12Updated 3 years ago
- Process and analyze surfaces using vedo in napari.☆24Updated last year
- Adaptive Optics plugin for MicroManager☆12Updated 2 years ago
- dask empowered fast4dreg☆11Updated 5 months ago
- Archived: control, reconstruction, and analysis code for oblique plane microscopy.☆22Updated last month
- GDSC Single Molecule Light Microscopy ImageJ Plugins☆16Updated last week
- A collection of 3D image processing functions and applications with GPU implementation☆14Updated 4 years ago
- 4D reconstruction of developmental trajectories using spherical harmonics☆22Updated last month
- Z-stack Depth Colorcode ImageJ FIJI plugin☆24Updated 4 years ago
- GPU Deconvolution Library with C and Matlab API for nVidia GPUs☆21Updated 6 years ago
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆39Updated 3 weeks ago
- Things we use regularly☆29Updated 8 months ago
- A general illumination correction method for optical microscopy.☆41Updated 3 years ago
- ☆13Updated 5 years ago
- MultiModal Big Image Data Sharing and Exploration☆14Updated 2 years ago
- A plugin that enables image segmentation provided by Allen Institute for Cell Science☆16Updated last year
- Transform 3D cell surfaces into different representations including topographic maps, 3D spheres, and 2D images for doing optimized quant…☆27Updated 6 months ago
- Repo for the CZI Imaging Team's napari plugin Alfa Cohort collaboration☆11Updated 3 years ago
- Open-source, GPU accelerated code for deskewing and deconvolving lattice light sheet data☆25Updated 4 years ago
- some useful function to get Label from ROIs and vice versa , and more!☆12Updated 2 years ago
- Python module for registering and fusing multi-view microscopy data☆23Updated 2 months ago