Alternatives and similar repositories for whitematteranalysis

Users that are interested in whitematteranalysis are comparing it to the libraries listed below

• scilus / scilpy
  The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox
  ☆73Updated this week
• MASILab / PreQual
  An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images
  ☆52Updated 10 months ago
• pnlbwh / dMRIharmonization
  Multi-site dMRI harmonization
  ☆48Updated last month
• AthenaEPI / dmipy
  The open source toolbox for reproducible diffusion MRI-based microstructure estimation
  ☆107Updated 6 months ago
• yeatmanlab / AFQ
  Automated Fiber Quantification
  ☆77Updated last year
• SlicerDMRI / ORG-Atlases
  ORG Fiber Clustering White Matter Atlas
  ☆27Updated last year
• MASILab / Synb0-DISCO
  Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps
  ☆73Updated 11 months ago
• Deep-MI / fsqc
  A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data
  ☆63Updated 7 months ago
• gbarisano / alps
  Bash script to compute DTI-ALPS
  ☆57Updated 3 weeks ago
• mathieuboudreau / qsm-tools
  List of open-source quantitative susceptibility mapping (QSM) MRI software packages and data
  ☆67Updated 2 years ago
• xiangruili / dicm2nii
  DICOM to NIfTI conversion, NIfTI tools
  ☆97Updated 10 months ago
• daducci / AMICO
  Accelerated Microstructure Imaging via Convex Optimization (AMICO) from diffusion MRI data
  ☆109Updated 5 months ago
• ExploreASL / ExploreASL
  ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…
  ☆53Updated last week
• rordenlab / niimath
  niimath - a clone of fslmaths. Try the live demo:
  ☆63Updated 3 weeks ago
• hMRI-group / hMRI-toolbox
  A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)
  ☆69Updated this week
• KUL-Radneuron / KUL_VBG
  A workflow to allow Freesurfer recon-all to run on brain image with gliomas
  ☆29Updated last year
• pBFSLab / FastCSR
  ☆28Updated last year
• PennLINC / qsiprep
  Preprocessing of diffusion MRI
  ☆155Updated last month
• mezera / mrQ
  mrQ_BoxJoinBox
  ☆22Updated last year
• sameerd / DiffusionTensorImaging
  Single Shell Free Water Elimination Model for Diffusion Tensor Imaging
  ☆25Updated last year
• CompImg / LST-AI
  LST-AI - Deep Learning Ensemble for Accurate MS Lesion Segmentation
  ☆35Updated 3 months ago
• Haoyulance / WPSS
  Weakly supervised perivascular spaces segmentation with salient guidance of Frangi filter
  ☆14Updated last year
• MASILab / cornn_tractography
  Convolutional-recurrent neural networks approximate diffusion tractography from T1-weighted MRI and associated anatomical context
  ☆17Updated last year
• hufsaim / pvsseg
  perivascular space segmentation
  ☆15Updated 2 years ago
• MIC-DKFZ / radtract
  RadTract: enhanced tractometry with radiomics-based imaging biomarkers for improved predictive modelling.
  ☆11Updated 11 months ago
• neurolabusc / Clinical
  Clinical Toolbox for SPM (https://www.nitrc.org/projects/clinicaltbx/)
  ☆46Updated 4 years ago
• thalamicseg / thomas_new
  Segmentation of the thalamus into 11 nuclei and MTT using white-matter-nulled MPRAGE MRI image contrast with support now for standard MPR…
  ☆23Updated 4 months ago
• AICONSlab / SynthSegCSVD
  CNN-based segmentation tool for segmenting PVS on T1 and WMH on FLAIR MRI
  ☆13Updated 2 months ago
• BioMedIA / dhcp-structural-pipeline
  structural analysis of neonatal brain MRI scans
  ☆53Updated 3 years ago
• mjallais / uGUIDE
  ☆22Updated last month