Alternatives and similar repositories for whitematteranalysis

Users that are interested in whitematteranalysis are comparing it to the libraries listed below

• AthenaEPI / dmipy
  The open source toolbox for reproducible diffusion MRI-based microstructure estimation
  ☆112Updated last year
• yeatmanlab / AFQ
  Automated Fiber Quantification
  ☆77Updated last year
• MASILab / PreQual
  An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images
  ☆53Updated last year
• BioMedIA / dhcp-structural-pipeline
  structural analysis of neonatal brain MRI scans
  ☆58Updated 4 years ago
• MASILab / Synb0-DISCO
  Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps
  ☆79Updated 4 months ago
• sameerd / DiffusionTensorImaging
  Single Shell Free Water Elimination Model for Diffusion Tensor Imaging
  ☆30Updated last year
• scilus / scilpy
  The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox
  ☆78Updated this week
• Deep-MI / fsqc
  A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data
  ☆67Updated 2 weeks ago
• MIC-DKFZ / TractSeg
  Automatic White Matter Bundle Segmentation
  ☆249Updated 2 years ago
• pnlbwh / dMRIharmonization
  Multi-site dMRI harmonization
  ☆49Updated 6 months ago
• hufsaim / pvsseg
  perivascular space segmentation
  ☆17Updated 3 years ago
• yeatmanlab / pyAFQ
  Please visit our new location: https://github.com/tractometry/pyAFQ
  ☆60Updated last year
• PennLINC / qsiprep
  Preprocessing of diffusion MRI
  ☆169Updated this week
• neurolabusc / Clinical
  Clinical Toolbox for SPM (https://www.nitrc.org/projects/clinicaltbx/)
  ☆47Updated 4 years ago
• pboutinaud / SHIVA_PVS
  Perivascular (PVS) or Virchow–Robin Spaces (VRS) segmentation with a 3D Unet
  ☆34Updated last year
• ExploreASL / ExploreASL
  ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…
  ☆55Updated last month
• xiangruili / dicm2nii
  DICOM to NIfTI conversion, NIfTI tools
  ☆102Updated 3 months ago
• mathieuboudreau / qsm-tools
  List of open-source quantitative susceptibility mapping (QSM) MRI software packages and data
  ☆70Updated 2 years ago
• PennLINC / aslprep
  Preprocessing of arterial spin labeling (ASL) data
  ☆52Updated last week
• SlicerDMRI / ORG-Atlases
  ORG Fiber Clustering White Matter Atlas
  ☆29Updated last month
• daducci / AMICO
  Accelerated Microstructure Imaging via Convex Optimization (AMICO) from diffusion MRI data
  ☆118Updated 2 months ago
• hMRI-group / hMRI-toolbox
  A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)
  ☆74Updated 2 weeks ago
• gbarisano / alps
  Bash script to compute DTI-ALPS
  ☆70Updated 2 months ago
• mezera / mrQ
  mrQ_BoxJoinBox
  ☆23Updated 2 years ago
• yu02019 / BEN
  ☆31Updated last year
• Haoyulance / WPSS
  Weakly supervised perivascular spaces segmentation with salient guidance of Frangi filter
  ☆16Updated 2 years ago
• npnl / PALS
  Pipeline for Analysing Lesions after Stroke (PALS) is a scalable and user-friendly toolbox designed to facilitate standardised analysis a…
  ☆24Updated 8 months ago
• vishnubashyam / DeepBrainNet
  Convolutional Neural Network trained for age prediction using a large (n=11,729) set of MRI scans from a highly diversified cohort spanni…
  ☆56Updated 5 years ago
• rpomponio / neuroHarmonize
  Harmonization tools for multi-site neuroimaging analysis. Implemented as a python package. Harmonization of MRI, sMRI, dMRI, fMRI variabl…
  ☆113Updated this week
• thalamicseg / thomas_new
  This version is OBSOLETE. Please use http://github.com/thalamicseg/hipsthomasdocker which is the latest and maintained © Copyright Manoj…
  ☆25Updated last month