Diffusion MRI analysis and visualization in 3D Slicer open source medical imaging platform.
☆87Apr 11, 2026Updated 2 months ago
Alternatives and similar repositories for SlicerDMRI
Users that are interested in SlicerDMRI are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- White matter tractography clustering and more...☆81Jun 13, 2025Updated 11 months ago
- Purifibre removes spurious streamlines from tractograms☆10Apr 14, 2022Updated 4 years ago
- ORG Fiber Clustering White Matter Atlas☆31Oct 18, 2025Updated 7 months ago
- ISBI 2023 - A Registration- and Uncertainty-based Framework for White Matter Tract Segmentation with Only One Annotated Subject☆10Sep 10, 2023Updated 2 years ago
- MITK Diffusion - Official part of the Medical Imaging Interaction Toolkit☆103Feb 24, 2026Updated 3 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A Tractography Tool for Diffusion MRI☆156Updated this week
- Please visit our new location: https://github.com/tractometry/pyAFQ☆60Oct 10, 2024Updated last year
- Tract based spatial statistics using ANTs and FSL☆17Mar 10, 2025Updated last year
- This repository contains the SlicerFreeSurferImporter extension for 3D Slicer. The extension implements a module for importing models, sc…☆18Apr 10, 2026Updated 2 months ago
- Simple Scripted Module to batch process patients in 3D Slicer☆19Jun 26, 2025Updated 11 months ago
- Harvard-Oxford Atlas 2.0 Subcortical parcellations of Human Connectome Project (HCP) subjects☆13Aug 7, 2024Updated last year
- MATLAB toolbox implementing template independent component analysis☆12Sep 14, 2020Updated 5 years ago
- Utility extension for 3D Slicer, containing tools and algorithms for building image guided surgery applications☆17May 14, 2026Updated 3 weeks ago
- NeuroSegmentation extension for 3D Slicer☆18Apr 23, 2024Updated 2 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- MRtrix3 provides a set of tools to perform various advanced diffusion MRI analyses, including constrained spherical deconvolution (CSD), …☆351Updated this week
- Validator for the Brain Imaging Data Structure☆45Jun 3, 2026Updated last week
- This helps creating high quality figures for use in manuscripts and presentations.☆12May 14, 2025Updated last year
- R package to implement template ICA☆11May 20, 2025Updated last year
- 3D Slicer extension for exporting Slicer scenes to use in the OpenAnatomy.org browser☆26Oct 8, 2025Updated 8 months ago
- Multi-platform, free open source software for visualization and image computing.☆2,492Updated this week
- Collection of 3D Slicer modules mainly focused on deep brain stimulation applications.☆18Nov 10, 2025Updated 7 months ago
- DMRITool is an open souce toolbox for reconstruction, processing and visualization of diffusion MRI data (DWI, tensor, ODF,EAP, fibers et…☆26May 11, 2019Updated 7 years ago
- Scripts used to recreate the results of the ISMRM 2015 Tractography Challenge☆18Dec 9, 2022Updated 3 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Preprocessing of diffusion MRI☆183Updated this week
- defacing utility for MRI images☆140Jun 1, 2026Updated last week
- Personal portfolio☆13Updated this week
- Node wrapper for DCMTK☆25Jan 3, 2023Updated 3 years ago
- PNL pipeline for NIFTI images☆13Jun 2, 2025Updated last year
- Implementation of the White Matter Query Language and associated tools for dMRI white matter tract extraction and analysis☆31Jul 24, 2025Updated 10 months ago
- fMRIPrep for Rodents☆13Feb 17, 2026Updated 3 months ago
- ☆23Jan 18, 2022Updated 4 years ago
- Slicer extensions index☆86Updated this week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A Python wrapper for the Elastix image registration software package.☆14Mar 27, 2024Updated 2 years ago
- Generate subject connectomes from raw BIDS data & perform inter-subject connection density normalisation, using the MRtrix3 software pac…☆54Apr 26, 2026Updated last month
- Example extension for 3D Slicer that demonstrates how to make a Python script available as a CLI module☆20Feb 28, 2024Updated 2 years ago
- FSL-R Interface package☆45May 19, 2026Updated 3 weeks ago
- Radial Basis Functions in Julia☆15Jun 2, 2026Updated last week
- Automated plotting of neuroimaging maps from Python using Connectome Workbench.☆16Apr 3, 2024Updated 2 years ago
- Tool for downloading ABCD_BIDS inputs and derivatives from the ABCD-BIDS NDA Collection 3165.☆25Aug 13, 2024Updated last year