DevelopmentalImagingMCRI / karawunLinks
Convert tractography studies from mrtrix into dicom for use in navigation software
☆15Updated 4 months ago
Alternatives and similar repositories for karawun
Users that are interested in karawun are comparing it to the libraries listed below
Sorting:
- perivascular space segmentation☆16Updated 2 years ago
- An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images☆52Updated 11 months ago
- A workflow to allow Freesurfer recon-all to run on brain image with gliomas☆29Updated last year
- Clinical Toolbox for SPM (https://www.nitrc.org/projects/clinicaltbx/)☆46Updated 4 years ago
- Segmentation of Choroid Plexus using Gaussian Mixture Model☆17Updated 3 months ago
- The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox☆73Updated this week
- Please visit our new location: https://github.com/tractometry/pyAFQ☆60Updated 9 months ago
- Multi-site dMRI harmonization☆48Updated 2 months ago
- White matter tractography clustering and more...☆76Updated last month
- Automated Fiber Quantification☆77Updated last year
- niimath - a clone of fslmaths. Try the live demo:☆66Updated last week
- Code and model of article "End-to-end learning of brain tissue segmentation from imperfect labeling" https://arxiv.org/abs/1612.00940☆16Updated 7 years ago
- structural analysis of neonatal brain MRI scans☆54Updated 3 years ago
- ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…☆53Updated last week
- Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps☆73Updated 11 months ago
- The open source toolbox for reproducible diffusion MRI-based microstructure estimation☆107Updated 7 months ago
- CNN-based segmentation tool for segmenting PVS on T1 and WMH on FLAIR MRI☆13Updated 3 months ago
- A re-implementation of antsMultivariateTemplateConstruction2.sh using optimized image pyramid scale-space and qbatch support☆28Updated last week
- KUL/UZ NeuroImaging Suite. A set of tools for brain and spine MRI analysis.☆19Updated last month
- AICONSlab's white matter hyperintensities (WMH) segmentation algorithm using CNNs☆18Updated 9 months ago
- DICOM to NIfTI conversion, NIfTI tools☆98Updated 10 months ago
- List of open-source quantitative susceptibility mapping (QSM) MRI software packages and data☆68Updated 2 years ago
- Preprocessing of diffusion MRI☆158Updated 2 months ago
- Preprocessing of arterial spin labeling (ASL) data☆50Updated 2 weeks ago
- Scripts to prepare MP2RAGE for Freesurfer☆28Updated last year
- A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data☆63Updated last week
- ☆28Updated last year
- APPIAN is an open-source automated software pipeline for analyzing PET images in conjunction with MRI. The goal of APPIAN is to make PET …☆41Updated 10 months ago
- LGI: Cortical Shape-Adaptive Local Gyrification Index☆12Updated 4 years ago
- WM tract atlases for the human (HCP and UK Biobank) and Macaque brain and connectivity blueprint atlases for the human (HCP) and macaque …☆15Updated 3 years ago