demianw / tract_querier
Implementation of the White Matter Query Language and associated tools for dMRI white matter tract extraction and analysis
☆29Updated 2 months ago
Alternatives and similar repositories for tract_querier:
Users that are interested in tract_querier are comparing it to the libraries listed below
- Processing tools for high-resolution neuroimaging☆72Updated 4 months ago
- VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.☆73Updated 9 months ago
- niimath - a clone of fslmaths. Try the live demo:☆60Updated 3 months ago
- Multi-site dMRI harmonization☆47Updated this week
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆67Updated last year
- The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox☆66Updated this week
- Automated Fiber Quantification☆77Updated last year
- BIDS app wrapping recon-all from FreeSurfer☆42Updated 5 months ago
- Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data☆76Updated 4 years ago
- Using ANTs to process multiple MR image types for a single subject☆24Updated 7 years ago
- Common workflows for MRI (anatomical, functional, diffusion, etc)☆95Updated 3 weeks ago
- Version 2 of the minc-toolkit, uses tools based on ITK version 4.x☆53Updated 3 weeks ago
- An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images☆50Updated 8 months ago
- defacing utility for MRI images☆119Updated last year
- Gradient Unwarping in Python☆35Updated 3 months ago
- dMRI based fiber tracking using parallel transport tractography☆26Updated last month
- fMRIPrep Lifespan - A robust, transparent workflow tailored for neonate and infant MRI☆29Updated last week
- Please visit our new location: https://github.com/tractometry/pyAFQ☆60Updated 6 months ago
- A MATLAB toolbox for performing along-tract analysis of diffusion tensor imaging (DTI) MRI tractography data.☆44Updated 12 years ago
- A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)☆67Updated this week
- A re-implementation of antsMultivariateTemplateConstruction2.sh using optimized image pyramid scale-space and qbatch support☆25Updated 3 weeks ago
- For calculating exact geodesic distances on cortical surface meshes☆53Updated 8 months ago
- Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes☆35Updated 3 weeks ago
- Neuroimaging widgets for jupyter notebooks☆87Updated 2 years ago
- Code and model of article "End-to-end learning of brain tissue segmentation from imperfect labeling" https://arxiv.org/abs/1612.00940☆16Updated 7 years ago
- NiiStat is a set of Matlab scripts for analyzing neuroimaging data from clinical populations☆31Updated 4 years ago
- Scripts and documentation for the PCP's protocol for assessing data quality.☆40Updated 3 years ago
- Multimodal Surface Matching with Higher order Clique Reduction: Mac OS and Linux binaries☆38Updated 2 years ago
- Preprocessing scripts for neuro imaging☆107Updated last year
- Multiple Automatically Generated Templates brain segmentation algorithm☆48Updated 9 months ago