Alternatives and similar repositories for tract_querier

Users that are interested in tract_querier are comparing it to the libraries listed below

• cMadan / openMorph
  Curated list of open-access databases with human structural MRI data
  ☆129Updated 6 years ago
• neuronets / nobrainer
  A framework for developing neural network models for 3D image processing.
  ☆167Updated 2 weeks ago
• pyxnat / pyxnat
  XNAT in Python
  ☆76Updated 5 months ago
• moloney / dcmstack
  DICOM to Nifti conversion with meta data preservation
  ☆77Updated 10 months ago
• scilus / scilpy
  The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox
  ☆77Updated 3 weeks ago
• poldracklab / pydeface
  defacing utility for MRI images
  ☆127Updated last year
• BIC-MNI / minc-toolkit-v2
  Version 2 of the minc-toolkit, uses tools based on ITK version 4.x
  ☆53Updated 5 months ago
• jeffduda / NeuroBattery
  Using ANTs to process multiple MR image types for a single subject
  ☆26Updated 8 years ago
• nipreps / niworkflows
  Common workflows for MRI (anatomical, functional, diffusion, etc)
  ☆105Updated this week
• neurospin / pypreprocess
  Preprocessing scripts for neuro imaging
  ☆110Updated 2 years ago
• nighres / nighres
  Processing tools for high-resolution neuroimaging
  ☆72Updated 11 months ago
• pnlbwh / dMRIharmonization
  Multi-site dMRI harmonization
  ☆49Updated 5 months ago
• nipreps / dmriprep
  dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…
  ☆71Updated 2 weeks ago
• nipy / niwidgets
  Neuroimaging widgets for jupyter notebooks
  ☆87Updated 2 years ago
• MASILab / PreQual
  An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images
  ☆52Updated last year
• CoBrALab / MAGeTbrain
  Multiple Automatically Generated Templates brain segmentation algorithm
  ☆50Updated last year
• SlicerDMRI / whitematteranalysis
  White matter tractography clustering and more...
  ☆80Updated 4 months ago
• rordenlab / niimath
  niimath - a clone of fslmaths. Try the live demo:
  ☆70Updated last week
• rii-mango / GIFTI-Reader-JS
  A JavaScript GIFTI file format reader.
  ☆13Updated 2 years ago
• scilus / tractoflow
  TractoFlow: A robust, efficient and reproducible diffusion MRI pipeline leveraging Nextflow & Singularity
  ☆60Updated last year
• raamana / visualqc
  VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.
  ☆74Updated 4 months ago
• sammba-mri / sammba-mri
  small mammals brain MRI
  ☆15Updated 2 years ago
• ofgulban / segmentator
  3D MRI data exploration and segmentation tool.
  ☆75Updated 2 years ago
• DevelopingHCP / structural-pipeline
  dHCP structural pipeline
  ☆16Updated 4 years ago
• yeatmanlab / pyAFQ
  Please visit our new location: https://github.com/tractometry/pyAFQ
  ☆59Updated last year
• bids-apps / freesurfer
  BIDS app wrapping recon-all from FreeSurfer
  ☆43Updated last month
• daducci / AMICO
  Accelerated Microstructure Imaging via Convex Optimization (AMICO) from diffusion MRI data
  ☆116Updated last month
• pnlbwh / ukftractography
  ☆30Updated 4 months ago
• NYU-DiffusionMRI / DESIGNER-v1
  Diffusion parameter EStImation with Gibbs and NoisE Removal pipeline
  ☆52Updated last year
• cookpa / pipedream
  PipeDream - open source neuroimaging pipelines
  ☆16Updated 6 years ago