Alternatives and similar repositories for tract_querier

Users that are interested in tract_querier are comparing it to the libraries listed below

• nighres / nighres
  Processing tools for high-resolution neuroimaging
  ☆71Updated 8 months ago
• scilus / scilpy
  The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox
  ☆73Updated this week
• nipreps / dmriprep
  dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…
  ☆69Updated last year
• scilus / tractoflow
  TractoFlow: A robust, efficient and reproducible diffusion MRI pipeline leveraging Nextflow & Singularity
  ☆59Updated 10 months ago
• neurospin / pypreprocess
  Preprocessing scripts for neuro imaging
  ☆110Updated last year
• nipreps / niworkflows
  Common workflows for MRI (anatomical, functional, diffusion, etc)
  ☆99Updated last week
• cMadan / openMorph
  Curated list of open-access databases with human structural MRI data
  ☆129Updated 6 years ago
• raamana / visualqc
  VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.
  ☆73Updated last month
• hMRI-group / hMRI-toolbox
  A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)
  ☆70Updated last week
• DevelopingHCP / structural-pipeline
  dHCP structural pipeline
  ☆16Updated 4 years ago
• rordenlab / niimath
  niimath - a clone of fslmaths. Try the live demo:
  ☆66Updated this week
• pnlbwh / dMRIharmonization
  Multi-site dMRI harmonization
  ☆48Updated 2 months ago
• moloney / dcmstack
  DICOM to Nifti conversion with meta data preservation
  ☆75Updated 8 months ago
• Conxz / multiBrain
  A list of brain imaging datasets with multiple scans per subject. Feel free to update the list via 'pull requests'!
  ☆95Updated 4 months ago
• neuronets / nobrainer
  A framework for developing neural network models for 3D image processing.
  ☆165Updated last month
• PennLINC / qsiprep
  Preprocessing of diffusion MRI
  ☆160Updated this week
• bids-apps / freesurfer
  BIDS app wrapping recon-all from FreeSurfer
  ☆42Updated 9 months ago
• daducci / AMICO
  Accelerated Microstructure Imaging via Convex Optimization (AMICO) from diffusion MRI data
  ☆112Updated 6 months ago
• MASILab / PreQual
  An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images
  ☆52Updated last year
• poldracklab / pydeface
  defacing utility for MRI images
  ☆125Updated last year
• Washington-University / gradunwarp
  Gradient Unwarping in Python
  ☆37Updated 7 months ago
• BIC-MNI / minc-toolkit-v2
  Version 2 of the minc-toolkit, uses tools based on ITK version 4.x
  ☆53Updated 2 months ago
• Entodi / MeshNet
  Code and model of article "End-to-end learning of brain tissue segmentation from imperfect labeling" https://arxiv.org/abs/1612.00940
  ☆16Updated 7 years ago
• Qoala-T / QC
  Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data
  ☆77Updated 4 years ago
• AthenaEPI / dmipy
  The open source toolbox for reproducible diffusion MRI-based microstructure estimation
  ☆107Updated 8 months ago
• CoBrALab / MAGeTbrain
  Multiple Automatically Generated Templates brain segmentation algorithm
  ☆50Updated last year
• JosePMarques / MP2RAGE-related-scripts
  MP2RAGE Scripts - T1 map correction & Background noise removal
  ☆64Updated 2 years ago
• braincharter / vasculature
  Region- and voxel-based probabilistic mapping of whole-brain veins and arteries (densities and diameter) in the MNI space
  ☆50Updated 3 years ago
• yeatmanlab / pyAFQ
  Please visit our new location: https://github.com/tractometry/pyAFQ
  ☆60Updated 9 months ago
• jeffduda / NeuroBattery
  Using ANTs to process multiple MR image types for a single subject
  ☆25Updated 7 years ago