Alternatives and similar repositories for ORG-Atlases

Users that are interested in ORG-Atlases are comparing it to the libraries listed below

• SlicerDMRI / whitematteranalysis
  White matter tractography clustering and more...
  ☆80Updated 3 months ago
• BioMedIA / dhcp-structural-pipeline
  structural analysis of neonatal brain MRI scans
  ☆57Updated 4 years ago
• braincharter / vasculature
  Region- and voxel-based probabilistic mapping of whole-brain veins and arteries (densities and diameter) in the MNI space
  ☆50Updated 3 years ago
• neurolabusc / Clinical
  Clinical Toolbox for SPM (https://www.nitrc.org/projects/clinicaltbx/)
  ☆47Updated 4 years ago
• miykael / gif_your_nifti
  How to create fancy GIFs from an MRI brain image
  ☆123Updated last year
• npnl / PALS
  Pipeline for Analysing Lesions after Stroke (PALS) is a scalable and user-friendly toolbox designed to facilitate standardised analysis a…
  ☆24Updated 6 months ago
• AthenaEPI / dmipy
  The open source toolbox for reproducible diffusion MRI-based microstructure estimation
  ☆108Updated 10 months ago
• scilus / scilpy
  The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox
  ☆77Updated this week
• MASILab / Synb0-DISCO
  Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps
  ☆77Updated 2 months ago
• volBrain / AssemblyNet
  AssemblyNet: 3D Whole Brain MRI segmentation pipeline
  ☆65Updated 2 years ago
• mezera / mrQ
  mrQ_BoxJoinBox
  ☆22Updated 2 years ago
• yeatmanlab / AFQ
  Automated Fiber Quantification
  ☆77Updated last year
• CBICA / NiChart_Project
  Neuro Imaging Chart of AI-based Imaging Biomarkers
  ☆22Updated this week
• rordenlab / niimath
  niimath - a clone of fslmaths. Try the live demo:
  ☆69Updated this week
• PennLINC / qsiprep
  Preprocessing of diffusion MRI
  ☆165Updated last month
• xiangruili / dicm2nii
  DICOM to NIfTI conversion, NIfTI tools
  ☆101Updated last month
• yeatmanlab / pyAFQ
  Please visit our new location: https://github.com/tractometry/pyAFQ
  ☆59Updated last year
• wwu-mmll / deepbet
  Fast brain extraction using neural networks
  ☆42Updated last year
• sameerd / DiffusionTensorImaging
  Single Shell Free Water Elimination Model for Diffusion Tensor Imaging
  ☆30Updated last year
• pboutinaud / SHIVA_PVS
  Perivascular (PVS) or Virchow–Robin Spaces (VRS) segmentation with a 3D Unet
  ☆33Updated 11 months ago
• MASILab / PreQual
  An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images
  ☆52Updated last year
• frankyeh / DSI-Studio
  A Tractography Tool for Diffusion MRI
  ☆142Updated this week
• baranaydogan / purifibre
  Purifibre removes spurious streamlines from tractograms
  ☆10Updated 3 years ago
• hufsaim / pvsseg
  perivascular space segmentation
  ☆17Updated 3 years ago
• daducci / AMICO
  Accelerated Microstructure Imaging via Convex Optimization (AMICO) from diffusion MRI data
  ☆115Updated 3 weeks ago
• hMRI-group / hMRI-toolbox
  A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)
  ☆72Updated 3 weeks ago
• PennLINC / aslprep
  Preprocessing of arterial spin labeling (ASL) data
  ☆51Updated last week
• MASILab / cornn_tractography
  Convolutional-recurrent neural networks approximate diffusion tractography from T1-weighted MRI and associated anatomical context
  ☆20Updated 2 months ago
• Deep-MI / fsqc
  A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data
  ☆65Updated last month
• APPIAN-PET / APPIAN
  APPIAN is an open-source automated software pipeline for analyzing PET images in conjunction with MRI. The goal of APPIAN is to make PET …
  ☆42Updated last year