SlicerDMRI / ORG-Atlases
ORG Fiber Clustering White Matter Atlas
☆26Updated last year
Related projects ⓘ
Alternatives and complementary repositories for ORG-Atlases
- White matter tractography clustering and more...☆69Updated 4 months ago
- Region- and voxel-based probabilistic mapping of whole-brain veins and arteries (densities and diameter) in the MNI space☆49Updated 2 years ago
- The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox☆62Updated this week
- dMRI based fiber tracking using parallel transport tractography☆18Updated 3 weeks ago
- Clinical Toolbox for SPM (https://www.nitrc.org/projects/clinicaltbx/)☆41Updated 3 years ago
- An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images☆45Updated 3 months ago
- structural analysis of neonatal brain MRI scans☆52Updated 3 years ago
- Multi-site dMRI harmonization☆46Updated 10 months ago
- Pipeline for Analysing Lesions after Stroke (PALS) is a scalable and user-friendly toolbox designed to facilitate standardised analysis a…☆23Updated last week
- Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps☆60Updated 4 months ago
- Harmonization tools for multi-site neuroimaging analysis. Implemented as a python package. Harmonization of MRI, sMRI, dMRI, fMRI variabl…☆83Updated 5 months ago
- A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)☆61Updated this week
- DL+DiReCT - Direct Cortical Thickness Estimation using Deep Learning-based Anatomy Segmentation and Cortex Parcellation☆24Updated last month
- A workflow to allow Freesurfer recon-all to run on brain image with gliomas☆28Updated 5 months ago
- Preprocessing of arterial spin labeling (ASL) data☆41Updated last week
- A re-implementation of antsMultivariateTemplateConstruction2.sh using optimized image pyramid scale-space and qbatch support☆23Updated 2 months ago
- a tool to segment the hypothalamus and associated subunits on T1-weighted MRI scans☆23Updated last year
- A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data☆57Updated last week
- CNN-based segmentation tool for segmenting PVS on T1 and WMH on FLAIR MRI☆11Updated 5 months ago
- ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…☆45Updated last week
- AssemblyNet: 3D Whole Brain MRI segmentation pipeline☆48Updated last year
- mrQ_BoxJoinBox☆21Updated last year
- niimath - a clone of fslmaths. Try the live demo:☆55Updated 2 months ago
- The open source toolbox for reproducible diffusion MRI-based microstructure estimation☆97Updated 2 months ago
- A Python project that provides a wrapping over the FreeSurfer software interface.☆9Updated 5 years ago
- perivascular space segmentation☆13Updated 2 years ago
- Purifibre removes spurious streamlines from tractograms☆10Updated 2 years ago
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆64Updated 11 months ago
- Diffusion parameter EStImation with Gibbs and NoisE Removal pipeline☆51Updated 8 months ago
- Version 2 of the minc-toolkit, uses tools based on ITK version 4.x☆49Updated last month