The open source toolbox for reproducible diffusion MRI-based microstructure estimation
☆121Jul 15, 2026Updated last week
Alternatives and similar repositories for dmipy
Users that are interested in dmipy are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Microstructure Diffusion Toolbox☆60Mar 4, 2024Updated 2 years ago
- Accelerated Microstructure Imaging via Convex Optimization (AMICO) from diffusion MRI data☆130Dec 19, 2025Updated 7 months ago
- Gray-matter Based Spatial Statistics☆23Apr 19, 2023Updated 3 years ago
- Automated Fiber Quantification☆77Mar 6, 2024Updated 2 years ago
- Automatic White Matter Bundle Segmentation☆264Feb 23, 2026Updated 5 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Microscopic diffusion anisotropy imaging made easy!☆26Jan 14, 2019Updated 7 years ago
- Toolbox for parameter estimation of the Standard Model of diffusion in white matter☆30Apr 6, 2026Updated 3 months ago
- The Monte Carlo Diffusion and Collision simulator (MC/DC), is a C++ open-source Diffusion-Weighted Magnetic Resonance Imaging (DW-MRI) Mo…☆27Jul 1, 2026Updated 3 weeks ago
- Diffusion parameter EStImation with Gibbs and NoisE Removal pipeline☆51Mar 5, 2024Updated 2 years ago
- MATLAB code for Multidimensional Diffusion MRI☆52Jun 23, 2026Updated last month
- The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox☆97Updated this week
- BRAinNetome fMRI Toolkit -- MATLAB scripts/GUIs for fMRI data pre-/post-processes☆15Oct 12, 2020Updated 5 years ago
- Create realistic digital phantoms in diffusion MRI.☆40Jul 4, 2023Updated 3 years ago
- Resources related to the Free Waveform Sequence (FWF)☆25Feb 5, 2026Updated 5 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆77Feb 14, 2026Updated 5 months ago
- Please visit our new location: https://github.com/tractometry/pyAFQ☆60Oct 10, 2024Updated last year
- The QDECR package for vertex-wise analyses in R☆12May 26, 2023Updated 3 years ago
- A command line tool for quantification of perfusion from ASL data☆14Jul 13, 2023Updated 3 years ago
- Diffusion parameter EStImation with Gibbs and NoisE Removal pipeline Version 2☆33Jul 10, 2026Updated 2 weeks ago
- Peak width of Skeletonized Mean Diffusivity (PSMD)☆21Apr 4, 2026Updated 3 months ago
- U fiber analysis: a toolbox for automated quantification of U-fibers and white matter hyperintensities☆12Updated this week
- An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images☆53Feb 11, 2026Updated 5 months ago
- Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure☆204Jul 9, 2026Updated 2 weeks ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- MITK Diffusion - Official part of the Medical Imaging Interaction Toolkit☆105Feb 24, 2026Updated 5 months ago
- SDnDTI Tutorial☆11Jun 22, 2022Updated 4 years ago
- [MedIA 2023] "Superficial White Matter Analysis: An Efficient Point-cloud-based Deep Learning Framework with Supervised Contrastive Learn…☆24Jul 21, 2023Updated 3 years ago
- Massively parallel Monte Carlo diffusion MR simulator written in Python.☆30Nov 2, 2024Updated last year
- Quantitative MRI Made Easy with qMRLab: MRI software for data Simulation, analysis and visualization☆177May 15, 2026Updated 2 months ago
- R library for structural neuroimaging. Provides high-level functions to access (read and write) and visualize surface-based brain morphom…☆77Jul 14, 2026Updated last week
- DIPY is the paragon 3D/4D+ medical imaging library in Python. Contains generic methods for spatial normalization, signal processing, mach…☆831Updated this week
- Analysis functions for surface-based analyses, using freesurfer and connectome workbench☆16Apr 19, 2024Updated 2 years ago
- Generic acquisition protocol for quantitative MRI of the spinal cord☆21Nov 22, 2025Updated 8 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- NOW - Numerical Optimization of gradient Waveforms☆20Apr 28, 2026Updated 2 months ago
- MRtrix3 provides a set of tools to perform various advanced diffusion MRI analyses, including constrained spherical deconvolution (CSD), …☆352Updated this week
- A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)☆82Updated this week
- MATLAB code for Multidimensional Diffusion MRI☆11Jun 28, 2021Updated 5 years ago
- TractoFlow: A robust, efficient and reproducible diffusion MRI pipeline leveraging Nextflow & Singularity☆63Sep 23, 2024Updated last year
- Demo for METSC: A microstructure estimation Transformer inspired by sparse representation for diffusion MRI (MedIA 2023).☆12Nov 13, 2023Updated 2 years ago
- A Tractography Tool for Diffusion MRI☆160Updated this week