Toolbox for parameter estimation of the Standard Model of diffusion in white matter
☆28Jun 24, 2025Updated 8 months ago
Alternatives and similar repositories for SMI
Users that are interested in SMI are comparing it to the libraries listed below
Sorting:
- Diffusion parameter EStImation with Gibbs and NoisE Removal pipeline Version 2☆31Feb 23, 2026Updated last week
- MATLAB code for Multidimensional Diffusion MRI☆50Oct 13, 2025Updated 4 months ago
- Reproduce the artice Hoy et al. 2014 Optimization of a free water elimination two-compartment model for diffusion tensor imaging. Neuroim…☆14Apr 12, 2019Updated 6 years ago
- ☆18Feb 6, 2026Updated 3 weeks ago
- Diffusion parameter EStImation with Gibbs and NoisE Removal pipeline☆51Mar 5, 2024Updated 2 years ago
- Microstructure Diffusion Toolbox☆60Mar 4, 2024Updated 2 years ago
- ☆13Feb 1, 2026Updated last month
- Resources related to the Free Waveform Sequence (FWF)☆24Feb 5, 2026Updated last month
- Massively parallel Monte Carlo diffusion MR simulator written in Python.☆29Nov 2, 2024Updated last year
- Microscopic diffusion anisotropy imaging made easy!☆27Jan 14, 2019Updated 7 years ago
- The open source toolbox for reproducible diffusion MRI-based microstructure estimation☆118Dec 4, 2024Updated last year
- ☆68Sep 12, 2025Updated 5 months ago
- Convolutional Neural Network trained for age prediction using a large (n=11,729) set of MRI scans from a highly diversified cohort spanni…☆58Sep 4, 2020Updated 5 years ago
- MATLAB/Octave tool for Monte-Carlo simulations of diffusion in biological tissues☆17Apr 28, 2021Updated 4 years ago
- Convert tractography studies from mrtrix into dicom for use in navigation software☆17Mar 1, 2025Updated last year
- Repository containing example usage of the DEcomposition and Component Analysis of Exponential Signals (DECAES) tool.☆15Jun 2, 2024Updated last year
- MP2RAGE Scripts - T1 map correction & Background noise removal☆72Feb 13, 2026Updated 3 weeks ago
- Parse Siemens PMU files☆14Jul 7, 2024Updated last year
- Julia package for microstructure imaging☆21Nov 24, 2025Updated 3 months ago
- Analysis package written in Python to analyze MRI phantoms developed by NIST and collaborators at NCI, RSNA, NIBIB☆17Apr 14, 2025Updated 10 months ago
- ☆18Apr 13, 2023Updated 2 years ago
- Segment axon and myelin from microscopy data. Written in Matlab.☆19Jun 12, 2019Updated 6 years ago
- Lightweight Python package to process MP2RAGE and ME-MP2RAGE-data☆23May 12, 2025Updated 9 months ago
- Lesion Identification with Neighborhood Data Analysis☆21May 1, 2020Updated 5 years ago
- An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images☆54Feb 11, 2026Updated 3 weeks ago
- Automatic White Matter Bundle Segmentation☆254Feb 23, 2026Updated last week
- ☆28Oct 1, 2025Updated 5 months ago
- Multiple Automatically Generated Templates brain segmentation algorithm☆50Jun 18, 2024Updated last year
- The Monte Carlo Diffusion and Collision simulator (MC/DC), is a C++ open-source Diffusion-Weighted Magnetic Resonance Imaging (DW-MRI) Mo…☆26May 9, 2025Updated 9 months ago
- Tools for reading, visualising and processing Magnetic Resonance Spectroscopy data☆26Feb 25, 2026Updated last week
- Matlab code for performing image reconstruction in MRI and performing the NORDIC denoising☆72May 28, 2025Updated 9 months ago
- Matlab implementation of Marchenko Pastur denoising (Veraart et al, NeuroImage 142 (2016) 394–406)☆35Nov 28, 2024Updated last year
- ☆28Feb 3, 2026Updated last month
- ISMRM Raw Data Format☆121Feb 11, 2026Updated 3 weeks ago
- A set of tools for processing Quantitative MR Images☆63Jul 14, 2025Updated 7 months ago
- Single Shell Free Water Elimination Model for Diffusion Tensor Imaging☆32Jan 18, 2024Updated 2 years ago
- parallel FSL processing without requiring SGE☆28Sep 3, 2021Updated 4 years ago
- A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)☆77Feb 2, 2026Updated last month
- MRI simulation toolkit☆33Dec 5, 2023Updated 2 years ago