Luthey-Schulten-Lab / Lattice_Microbes
☆32Updated 3 years ago
Alternatives and similar repositories for Lattice_Microbes:
Users that are interested in Lattice_Microbes are comparing it to the libraries listed below
- ☆99Updated 2 years ago
- MCell Monte Carlo Simulator of Cellular Microphysiology☆35Updated 11 months ago
- Modelling of Mycoplasma genitalium☆57Updated 2 years ago
- ANN based NMR peak picker☆17Updated last week
- Rule-based modeling framework☆61Updated 4 months ago
- Python framework for multi-parameter optimization and evaluation of protein folding models☆16Updated 3 years ago
- A general-purpose, stochastic, biochemical reaction simulator for large reaction networks☆17Updated 8 months ago
- BioSCRAPE (Bio-circuit Stochastic Single-cell Reaction Analysis and Parameter Estimation)☆20Updated this week
- A modular compiler for biological chemical reaction networks☆43Updated last week
- The specification of the MMTF format for biological structures☆44Updated last year
- Whole-cell modeling tutorials☆16Updated 4 years ago
- ☆31Updated 3 years ago
- Dynamic Flux Balance analysis in Python☆11Updated 9 years ago
- Repository for the paper "Optimal design of stochastic DNA synthesis protocols based on generative sequence models" (Weinstein et al., AI…☆31Updated 3 years ago
- Python Bioinformatics Toolkit for CATH (Protein Classification Database @ UCL)☆14Updated 4 months ago
- ADOPT: intrinsic protein disorder prediction through deep bidirectional transformers☆17Updated 2 months ago
- Interactive Python notebooks for PDBe API training☆49Updated last month
- ☆21Updated 4 years ago
- Tutorial on how to use Ginkgo AI embedding APIs for scientific problems☆19Updated 2 months ago
- Code used in the manuscript for De Novo Design of Bioactive Protein Switches☆16Updated 5 years ago
- Universal Transforming Geometric Network for protein structure prediction.☆8Updated 4 years ago
- CryoET Data Portal☆22Updated this week
- A Versatile and Open Source One- and Two-Photon Light-Sheet Microscope Design☆11Updated last year
- ☆18Updated 7 years ago
- Software tool for metabolic modelling in Systems Biology☆10Updated 4 years ago
- An efficient method for the conversion from internal to Cartesian coordinates that utilizes the platform-agnostic JAX Python library.☆15Updated 8 months ago
- C++ Accelerated Python Diffusion Maps Library☆23Updated 6 years ago
- ☆36Updated 4 months ago
- ☆35Updated 5 years ago
- Interpretable genotype-phenotype landscape modeling☆35Updated last year