Python framework for multi-parameter optimization and evaluation of protein folding models
☆18Apr 12, 2021Updated 5 years ago
Alternatives and similar repositories for PyFolding
Users that are interested in PyFolding are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Burst analysis software for smFRET. **Moved to OpenSMFS organization**☆16Mar 6, 2019Updated 7 years ago
- Convert Beker&Hickl, PicoQuant and other formats to Photon-HDF5☆17May 5, 2026Updated last month
- A collection of tutorials for the python implementation of Dynamical Network Analysis☆15Aug 6, 2025Updated 10 months ago
- ☆22May 15, 2025Updated last year
- Python Rapid Artificial Intelligence Ab Initio Molecular Dynamics☆26Aug 26, 2022Updated 3 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Methods for mapping genomic data onto 3D protein structure.☆28May 17, 2022Updated 4 years ago
- Cheminformatic analysis of small molecule type drugs in DrugBank for their ability to form nanoparticles with indocyanine dyes.☆11Apr 30, 2018Updated 8 years ago
- The molstar plugin for plotly dash framework☆32Mar 24, 2026Updated 2 months ago
- Functional builders for vecty elements (not maintained right now)☆10Nov 7, 2019Updated 6 years ago
- Global analysis platform for fluorescence data☆12May 4, 2026Updated last month
- The java implementation of the MMTF API, decoder and encoder.☆11Dec 19, 2025Updated 5 months ago
- Methods for the parallel and distributed analysis and mining of the Protein Data Bank using MMTF and Apache Spark.☆68Mar 27, 2023Updated 3 years ago
- BinaryCIF is a data format for storing text based CIF files using a more efficient binary encoding.☆31Oct 14, 2024Updated last year
- A collection of molecular modelling tools for UCSF Chimera☆18Mar 26, 2019Updated 7 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- class materials for MCB517A through UW/Fred Hutch☆12Dec 5, 2019Updated 6 years ago
- MDPath - A tool for calculating allosteric communication pathways in proteins by analyzing the mutual information of residue dihedral ang…☆30May 28, 2026Updated last week
- Human Primary T cells: A Practical Guide☆15Sep 18, 2018Updated 7 years ago
- An interactive visual simulator for distance-based protein folding☆25Mar 1, 2021Updated 5 years ago
- ☆11Mar 28, 2024Updated 2 years ago
- Providing default representations of common objects in Python land☆20Aug 23, 2017Updated 8 years ago
- Methods for mapping proteomics data on 3D protein structure.☆15Jan 18, 2020Updated 6 years ago
- Attempt at reproduction of AlphaFold2☆98Oct 23, 2024Updated last year
- An open-source library for the analysis of protein interactions.☆35Dec 5, 2021Updated 4 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Application for mutagenic primer design. Facilitates development of biocatalysts (Green Chemistry) and new therapeutic proteins.☆17Feb 14, 2026Updated 3 months ago
- Jupyter Notebook Utility☆24Oct 28, 2019Updated 6 years ago
- Intentional is an open-source framework to build reliable LLM chatbots that actually talk and behave as you expect.☆12Dec 31, 2024Updated last year
- Public releases of TARDIS☆11Feb 2, 2024Updated 2 years ago
- Collected scripts for Pymol☆10Mar 18, 2015Updated 11 years ago
- Protein structure descriptors and alignment based on 3D Zernike moments.☆40Apr 10, 2026Updated last month
- Openfold inference architecture for Amazon EKS☆11Oct 1, 2024Updated last year
- DLPacker☆33Aug 26, 2024Updated last year
- ☆15Apr 13, 2026Updated last month
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Automatic detection of equilibrated regions of molecular simulations☆18Dec 24, 2016Updated 9 years ago
- Deep ResNet-based protein contact prediction☆19Mar 30, 2020Updated 6 years ago
- Python Modeling Interface☆14May 28, 2026Updated last week
- TrackNTrace is an open source MATLAB framework for single molecule localization, tracking, and super-resolution applications written by S…☆17Feb 28, 2025Updated last year
- Generate intrinsically disordered peptide conformations via machine learning☆25May 26, 2024Updated 2 years ago
- pybroom, the python's broom to tidy up messy fit results!☆14Jun 21, 2017Updated 8 years ago
- AIMS - Automated Immune Molecule Separator: An analysis pipeline for distinguishing distinct subsets of Ig and MHC molecules. See below s…☆10Updated this week