quantumjot / PyFoldingLinks
Python framework for multi-parameter optimization and evaluation of protein folding models
☆17Updated 4 years ago
Alternatives and similar repositories for PyFolding
Users that are interested in PyFolding are comparing it to the libraries listed below
Sorting:
- ANN based NMR peak picker☆20Updated last month
- MaxEnt code for fitting simulation outcomes/statistical models to observations☆16Updated 2 years ago
- Container-based installation of pymol, with interaction through the browser via Jupyter notebook☆20Updated 6 years ago
- Make valid molecular graphs!☆22Updated last year
- ☆11Updated 6 years ago
- Data visualizations for biomolecular dynamics☆18Updated 6 years ago
- Automated omics-scale protein modeling and simulation setup.☆53Updated 3 years ago
- ☆36Updated 5 years ago
- A primer on statistical mechanics for biochemists☆46Updated 2 years ago
- SE(3)-equivariant point cloud networks for virtual screening☆20Updated 2 years ago
- Code used in the manuscript for De Novo Design of Bioactive Protein Switches☆16Updated 6 years ago
- Massively-Parallel Natural Extension of Reference Frame☆31Updated 2 years ago
- ☆21Updated 4 years ago
- Library for training Gaussian Processes on Molecules☆36Updated 3 years ago
- A novel approach to pose selection in protein-ligand docking based on graph theory.☆20Updated 8 years ago
- Graph Inference on MoLEcular Topology☆26Updated 2 years ago
- Python Bioinformatics Toolkit for CATH (Protein Classification Database @ UCL)☆14Updated 8 months ago
- An efficient method for the conversion from internal to Cartesian coordinates that utilizes the platform-agnostic JAX Python library.☆17Updated last year
- pyRMSD is a small Python package that aims to offer an integrative and efficient way of performing RMSD calculations of large sets of str…☆26Updated 4 years ago
- Mol* as anywidget☆39Updated 2 weeks ago
- Conda build recipe for the rdkit☆50Updated 3 years ago
- ☆18Updated 7 years ago
- Software for the prediction of FRET data from conformational ensembles.☆23Updated 6 months ago
- Minimal AlphaFold☆53Updated 10 months ago
- Dynamic Flux Balance analysis in Python☆11Updated 9 years ago
- SLIP is a sandbox environment for engineering protein sequences with synthetic fitness functions.☆19Updated last year
- C++ Accelerated Python Diffusion Maps Library☆23Updated 6 years ago
- Datasets for open forcefield parameterization and development☆11Updated 5 years ago
- A Python tool for parsing and analyzing electron density maps data available from the worldwide Protein Data Bank☆12Updated last year
- OCEAN - Optimized Cross rEActivity estimatioN☆11Updated 5 years ago