Janelia Workstation
☆28Jun 23, 2026Updated this week
Alternatives and similar repositories for workstation
Users that are interested in workstation are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Direct volume rendering with WebGL 2.☆12Jun 8, 2026Updated 3 weeks ago
- Software for camera acquisition and tracking of particles☆11Nov 22, 2022Updated 3 years ago
- Software for the reconstruction of multi-view microscopic acquisitions like Selective Plane Illumination Microscopy (SPIM) Data☆33Updated this week
- Running compute-intense parts of BigStitcher distributed☆30Updated this week
- This is where the Reiser Lab and colleagues are sharing tools and methods that are useful for lab experiments with _Drosophila_ neurobiol…☆19Updated this week
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Nextflow pipeline encapsulating workflows for analyzing expansion lattice light-sheet microscopy (ExLLSM) imagery☆13Apr 15, 2026Updated 2 months ago
- ImgLib2/BDV implementation of Stitching for large datasets☆80Updated this week
- ImgLib2-based viewer for registered SPIM stacks and more☆43Jun 15, 2026Updated last week
- GIve easy, high-level access to ome-zarr fileset☆24Sep 22, 2025Updated 9 months ago
- CHIPS, or Cellular and Hemodynamic Image Processing Suite, is an open-source MATLAB toolbox designed to analyse functional images of cell…☆17Oct 13, 2021Updated 4 years ago
- Archived: control, reconstruction, and analysis code for oblique plane microscopy.☆23Apr 1, 2025Updated last year
- Code for simulating a multi-view acquisition including attenuation, convolution, reduced sampling and poission noise☆13Jun 15, 2026Updated last week
- Behavior Classifier Component from the Jax Animal Behavior System☆25Updated this week
- Various parts made for fluorescence microscopy + optics work☆17Jul 22, 2019Updated 6 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Connecting Java/ImgLib2 + Python/NumPy☆31Jun 17, 2026Updated last week
- Interactive visualization tool for multiple volumes, meshes and points based on VTK. The app can be controlled with Python scripts (optio…☆11Mar 13, 2022Updated 4 years ago
- A framework for easy application of established machine learning techniques on large, multi-dimensional images.☆60Apr 24, 2026Updated 2 months ago
- High-throughput real-time tracker for delivery of stimuli and measurement of animal behavior.☆24Jan 4, 2026Updated 5 months ago
- An R toolbox for analysing movement across space and time☆11Jan 16, 2026Updated 5 months ago
- Unix table column and row manipulation using column names☆11Jun 17, 2026Updated last week
- ImageJ plugins for blind decomposition of fluorencence microscopy data☆10Mar 24, 2015Updated 11 years ago
- ☆18Nov 25, 2025Updated 7 months ago
- Semi-manual alignment to reference templates (SMART): An open source pipeline in R for whole brain mapping☆15Oct 27, 2021Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- This toolbox easily and automatically processes Neuropixels and Myomatrix data recorded during experiments☆13Aug 9, 2024Updated last year
- The Fluorescent Protein Database☆82Updated this week
- ☆115Jun 11, 2026Updated 2 weeks ago
- Example code for reading SpikeGLX metadata and binary files☆14Updated this week
- For developers and people training MARS models☆19Mar 15, 2024Updated 2 years ago
- GPU accelerated beam propagation tools for biological light tissue simulations☆37Sep 29, 2018Updated 7 years ago
- Designs for 3D printed parts that were developed in the Zhuang Lab.☆11Dec 2, 2020Updated 5 years ago
- Spigot plugin for Vivecraft, the VR mod for Java Minecraft.☆16May 25, 2025Updated last year
- Vasculature blood flow computation and impact of astrocytic endfeet on vessels☆11Feb 26, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Read and write files from the BrainGlobe neuroanatomy suite☆15Jun 2, 2026Updated 3 weeks ago
- Python package for writing 5D numpy arrays to HDF5 files readable by both Imaris and BigDataViewer☆12Aug 13, 2021Updated 4 years ago
- ☆14Sep 7, 2023Updated 2 years ago
- Baxter-like robotic arm that can be trained with human hands and a button press.☆17Aug 18, 2022Updated 3 years ago
- Python bindings for scalar and vectorial models of the 3D microscope point spread function.☆57May 20, 2024Updated 2 years ago
- My learning repository.☆36Apr 1, 2025Updated last year
- Adaptive Optics plugin for MicroManager☆13May 23, 2022Updated 4 years ago