Create a docker image for running ESMFold, solved conflicts between ESMFold and OpenFold dependencies
☆21Jun 5, 2024Updated last year
Alternatives and similar repositories for esmfold-docker-image
Users that are interested in esmfold-docker-image are comparing it to the libraries listed below
Sorting:
- Virus Protein Structural Analysis Toolkit☆13Sep 9, 2024Updated last year
- bakerlab pymol scripts☆26Feb 6, 2020Updated 6 years ago
- ☆15Jun 3, 2025Updated 9 months ago
- ☆16Dec 10, 2025Updated 2 months ago
- ☆27Feb 10, 2024Updated 2 years ago
- Origin-1: a generative AI platform for de novo antibody design against novel epitopes☆51Jan 15, 2026Updated last month
- pdbx is a parser module in python for structures of the protein data bank in the mmcif format☆30Aug 9, 2024Updated last year
- NeurIPS 2024 Dataset and Benchmark Submission "AsEP: Benchmarking Deep Learning Methods for Antibody-specific Epitope Prediction"☆31Aug 12, 2024Updated last year
- ☆37Dec 21, 2023Updated 2 years ago
- ParaAntiProt: Paratope Prediction Using Antibody and Protein Language Models☆10Jul 16, 2024Updated last year
- Collected scripts for Pymol☆10Mar 18, 2015Updated 10 years ago
- A Nextflow pipeline that creates reliable, structure-informed MSAs of thousands of protein sequences which can supplement structural info…☆11Nov 19, 2025Updated 3 months ago
- Code for designing biased protein states☆66Feb 13, 2026Updated 3 weeks ago
- rebuilds and completes models of protein complexes using AlphaFold2☆16Feb 26, 2026Updated last week
- ☆102Jun 16, 2025Updated 8 months ago
- Graphical Representation of Ancestral Sequence Predictions☆12Mar 6, 2023Updated 3 years ago
- ☆10Oct 31, 2025Updated 4 months ago
- A package to create, visualize, and analysis PDB-derived pseudo-ensembles.☆10Jan 7, 2026Updated 2 months ago
- A python implementation of pdb2oniom for QM/MM (ONIOM) calculations☆11Oct 2, 2025Updated 5 months ago
- A Python3 script for removal of outlier sequences from a multiple sequence alignment (FASTA format).☆10Jan 26, 2025Updated last year
- ☆24Dec 5, 2025Updated 3 months ago
- Terminal protein structure viewer — interactive 3D visualization of PDB/mmCIF structures with cartoon ribbons, braille rendering, and Six…☆43Updated this week
- Scripts to benchmark and train foldseek☆40May 22, 2024Updated last year
- ☆43Jan 10, 2024Updated 2 years ago
- ☆93Jan 28, 2026Updated last month
- Protein structure diffusion model for unconditional protein generation and motif scaffolding☆188Jun 24, 2024Updated last year
- Chemical Identification from images using a CNN☆12Sep 14, 2022Updated 3 years ago
- ☆11Oct 23, 2025Updated 4 months ago
- A Python framework for structural bioinformatics.☆14Jan 20, 2024Updated 2 years ago
- PREVENT: PRotein Engineering by Variational frEe eNergy approximaTion☆13Jul 4, 2024Updated last year
- websocket-benchmark☆11May 27, 2021Updated 4 years ago
- Deep learning + physical modeling for 3D protein metal ion binding prediction☆13Feb 24, 2025Updated last year
- ☆11Sep 27, 2022Updated 3 years ago
- A useful tool for shuffling biological sequences while preserving the k-let counts☆14Apr 23, 2024Updated last year
- ☆15Apr 3, 2025Updated 11 months ago
- Statistical inference of recent positive selection using IBD segments☆14Sep 23, 2025Updated 5 months ago
- ☆13Mar 2, 2026Updated last week
- Scripts to generate and analyze afdb clusters☆11Sep 15, 2023Updated 2 years ago
- Web-tool for calculating and visualizing hydrophobic protrusions☆11Feb 22, 2022Updated 4 years ago