arantir123 / MpbPPILinks
MpbPPI: A multi-task pre-training-based equivariant approach for the prediction of the effect of amino acid mutations on protein-protein interactions
☆16Updated 11 months ago
Alternatives and similar repositories for MpbPPI
Users that are interested in MpbPPI are comparing it to the libraries listed below
Sorting:
- A deep learning framework for predicting interactions between protein-protein interaction targets and modulators☆14Updated last year
- ☆21Updated 3 months ago
- The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…☆27Updated last year
- Learning Structure-based Pocket Representations for Protein-Ligand Interaction Prediction☆34Updated 2 years ago
- Computer aided proximal decaging as a universal strategy for temporal protein activation☆24Updated 3 months ago
- scripts to find PBD structures for cancer driver proteins☆31Updated 6 months ago
- This script can clean up the disordered region in the AlphaFold DB structures to adapt it to the molecular docking, extract the sequence …☆14Updated 2 years ago
- ☆77Updated last year
- Scoring methods for predicting the DDG upon protein mutation☆14Updated 2 years ago
- De novo design of small molecule binding sites into proteins☆12Updated 4 years ago
- Physical energy function for protein sequence design☆33Updated 2 years ago
- Code of our JC paper: "Structure-aware protein solubility prediction from sequence through graph convolutional network and predicted cont…☆75Updated 3 years ago
- Domain-PFP is a self-supervised method to predict protein functions from the domains☆14Updated last year
- This is a GitHub Repository containing the data and code used for a thorough comparison of 11 ligand binding site prediction tools☆16Updated 9 months ago
- Repo contains source code of the SurfaceID paper☆24Updated last year
- HELM-GPT: de novo macrocyclic peptide design using generative pre-trained transformer☆26Updated last year
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆32Updated last year
- A scoring function model based on 3D convolutional neural network for protein-ligand binding affinity prediction.☆16Updated 3 years ago
- ☆72Updated 5 years ago
- Making Protein folding accessible to all!☆22Updated last year
- ☆34Updated 5 months ago
- ☆28Updated last year
- ☆42Updated last year
- Fraction of Common Contacts Clustering Algorithm for Protein Structures☆27Updated 4 years ago
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆39Updated last year
- ☆46Updated 5 months ago
- KA-Search: Rapid and exhaustive sequence identity search of known antibodies☆23Updated last year
- NodeCoder is a general framework based on graph convolutional neural network for protein function prediction.☆33Updated last year
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆62Updated 2 months ago
- ☆26Updated last month