Alternatives and similar repositories for nifty

Users that are interested in nifty are comparing it to the libraries listed below

• AdaptiveParticles / LibAPR
  Library for producing and processing on the Adaptive Particle Representation (APR).
  ☆51Updated last week
• jni / skan
  Python module to analyse skeleton (thin object) images
  ☆139Updated 3 months ago
• scopetools / cudadecon
  GPU accelerated 3D image deconvolution using CUDA
  ☆39Updated last year
• janelia-flyem / gala
  Automatic segmentation of electron microscopy volumes
  ☆78Updated 5 years ago
• seung-lab / fastremap
  Remap, mask, renumber, unique, and in-place transposition of 3D labeled images. Point cloud too.
  ☆63Updated last month
• MIDA-group / globalign
  Fast global mutual information-based rigid alignment in the Fourier domain
  ☆32Updated last year
• maweigert / spimagine
  GPU accelerated volume rendering / processing in Python
  ☆120Updated 6 years ago
• hbldh / pyefd
  Python implementation of "Elliptic Fourier Features of a Closed Contour"
  ☆93Updated 2 years ago
• constantinpape / cluster_tools
  Distributed segmentation for bio-image-analysis
  ☆41Updated last week
• mbalatsko / opencv-rolling-ball
  Fully Ported to Python from ImageJ's Background Subtractor. Rolling ball and sliding paraboloid background subtraction algorithms.
  ☆51Updated 3 years ago
• bobpepin / YacuDecu
  GPU Deconvolution Library with C and Matlab API for nVidia GPUs
  ☆21Updated 6 years ago
• smithk / cidre
  A general illumination correction method for optical microscopy.
  ☆42Updated 4 years ago
• abria / TeraStitcher
  A tool for fast automatic 3D-stitching of teravoxel-sized microscopy images
  ☆93Updated last year
• clEsperanto / clij-opencl-kernels
  ☆21Updated last month
• maweigert / gputools
  GPU accelerated image/volume processing in Python
  ☆113Updated 9 months ago
• billkarsh / Alignment_Projects
  Aligner for large scale serial section image data
  ☆16Updated 2 years ago
• funkelab / gunpowder
  A library to facilitate machine learning on multi-dimensional images.
  ☆87Updated 3 weeks ago
• sciai-lab / mutex-watershed
  The mutex watershed for image segmentation.
  ☆67Updated 4 years ago
• constantinpape / z5
  Lightweight C++ and Python interface for datasets in zarr and N5 format
  ☆128Updated 2 weeks ago
• nicolasBeucher / mamba-image
  MAMBA is a mathematical morphology library
  ☆35Updated 8 years ago
• constantinpape / heimdall
  Python based viewer for large mulit-dimensional datasets.
  ☆20Updated 6 years ago
• m-albert / MVRegFus
  Python module for registering and fusing multi-view microscopy data
  ☆24Updated 10 months ago
• seung-lab / fill_voids
  Fill holes in binary 2D & 3D images fast.
  ☆29Updated 4 months ago
• jni / ray
  Automatic segmentation of electron microscopy volumes
  ☆30Updated 13 years ago
• seung-lab / neuroglancer
  WebGL-based viewer for volumetric data
  ☆24Updated this week
• mritools / cupyimg
  CuPy implementations of image and signal processing functions from NumPy, SciPy and scikit-image
  ☆46Updated 4 years ago
• aschampion / diluvian
  Flood filling networks for segmenting electron microscopy of neural tissue
  ☆25Updated 3 years ago
• hammerlab / flowdec
  TensorFlow Deconvolution for Microscopy Data
  ☆91Updated 3 years ago
• fiji / bUnwarpJ
  ImageJ/Fiji plugin for consistent elastic registration of 2D images
  ☆24Updated 3 years ago
• bene51 / gpu_deconvolution
  C and NVidia CUDA code for multi-view deconvolution
  ☆11Updated 9 years ago