A nifty library for graph based image segmentation.
☆47May 3, 2025Updated last year
Alternatives and similar repositories for nifty
Users that are interested in nifty are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Affinity based segmentation algorithms and tools☆12May 12, 2025Updated last year
- Utility functions for large-scale bio-image analysis.☆64Jul 1, 2026Updated 2 weeks ago
- Distributed segmentation for bio-image-analysis☆42Jun 5, 2026Updated last month
- Block-wise task scheduling for large nD volumes.☆32May 4, 2026Updated 2 months ago
- Solving LPs with convergent message passing☆23Aug 17, 2018Updated 7 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Deep-learning based semantic and instance segmentation for 3D Electron Microscopy and other bioimage analysis problems based on pytorch.☆127Updated this week
- Generalized algorithm for agglomerative clustering of signed graphs☆15Dec 16, 2021Updated 4 years ago
- Training and evaluation scripts for MALA (https://arxiv.org/abs/1709.02974).☆11Jun 23, 2021Updated 5 years ago
- The mutex watershed for image segmentation.☆68May 6, 2021Updated 5 years ago
- Tool for graph-based image segmentation and analysis☆22Nov 12, 2017Updated 8 years ago
- Multi-Object Tracking with Integer Linear Equations☆39Updated this week
- ☆116Jul 10, 2026Updated last week
- ☆22Jan 6, 2026Updated 6 months ago
- Noise Correction Algorithm for sCMOS cameras☆28Jan 15, 2020Updated 6 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Python module for registering and fusing multi-view microscopy data☆24Mar 8, 2025Updated last year
- Utilities for computing common accuracy metrics on cell tracking solutions with ground truth☆41Updated this week
- A python package for fitting splines.☆23Updated this week
- An efficient C++ implementation of various sequential and parallel maximum flow algorithms.☆22Jan 22, 2020Updated 6 years ago
- A fast multi-image tiff writer for Matlab☆18Jun 5, 2024Updated 2 years ago
- Toolkit for the generation and analysis of volume eletron microscopy based synaptic connectomes of brain tissue.☆45Jul 28, 2025Updated 11 months ago
- Distributed Proofreading of Automatic Segmentations☆15Sep 30, 2022Updated 3 years ago
- Python scripts to read and write the CREMI hdf5 file format.☆39Mar 21, 2023Updated 3 years ago
- Automatic segmentation of electron microscopy volumes☆80Jan 15, 2021Updated 5 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A unified environment for DNN-based automated segmentation of neuronal EM images☆38Aug 28, 2024Updated last year
- Segment Anything for Medical Imaging☆31Jun 6, 2026Updated last month
- (Python3, PyQt5) GUI software to tile large images. Designed to image 96-well plates used in wet labs.☆12Jun 28, 2018Updated 8 years ago
- dask empowered fast4dreg☆17Mar 11, 2026Updated 4 months ago
- Python based viewer for large mulit-dimensional datasets.☆20Jan 28, 2020Updated 6 years ago
- Total Variation Regularization of Pose Streams☆12Dec 8, 2019Updated 6 years ago
- A tool for cell instance aware segmentation in densely packed 3D volumetric images☆128Jul 6, 2026Updated 2 weeks ago
- ☆45Jul 10, 2026Updated last week
- 🌈☆70Oct 10, 2025Updated 9 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆10Nov 5, 2020Updated 5 years ago
- simple package for augmentation of n-dimensional arrays☆33Aug 10, 2023Updated 2 years ago
- python tools for BigDataViewer☆23Jul 2, 2026Updated 2 weeks ago
- Content-adaptive storage and processing of large volumetric microscopy data using the Adaptive Particle Representation (APR)☆21Aug 21, 2024Updated last year
- Block-wise operations for large nD volumes☆45Updated this week
- Notebooks for VoidSeg☆17Feb 10, 2020Updated 6 years ago
- Fast, optimal, extensible and cross-validated heterogeneous piecewise polynomial regression for timeseries☆14May 7, 2026Updated 2 months ago