DerThorsten / niftyLinks
A nifty library for graph based image segmentation.
☆47Updated 9 months ago
Alternatives and similar repositories for nifty
Users that are interested in nifty are comparing it to the libraries listed below
Sorting:
- Library for producing and processing on the Adaptive Particle Representation (APR).☆51Updated 2 weeks ago
- Python module to analyse skeleton (thin object) images☆139Updated this week
- Automatic segmentation of electron microscopy volumes☆78Updated 5 years ago
- The mutex watershed for image segmentation.☆67Updated 4 years ago
- GPU accelerated 3D image deconvolution using CUDA☆39Updated last year
- A library to facilitate machine learning on multi-dimensional images.☆87Updated last week
- Distributed segmentation for bio-image-analysis☆41Updated 3 weeks ago
- GPU accelerated image/volume processing in Python☆113Updated 9 months ago
- Python implementation of "Elliptic Fourier Features of a Closed Contour"☆93Updated 2 years ago
- A tool for fast automatic 3D-stitching of teravoxel-sized microscopy images☆93Updated last year
- GPU accelerated volume rendering / processing in Python☆120Updated 6 years ago
- Fill holes in binary 2D & 3D images fast.☆29Updated 4 months ago
- GPU Deconvolution Library with C and Matlab API for nVidia GPUs☆21Updated 6 years ago
- Aligner for large scale serial section image data☆16Updated 2 years ago
- Deprecated: Read and write image data from and to TIFF files.☆62Updated 7 years ago
- Fast global mutual information-based rigid alignment in the Fourier domain☆32Updated last year
- Lightweight C++ and Python interface for datasets in zarr and N5 format☆129Updated last month
- KNOSSOS is a software tool for the visualization and annotation of 3D image data and was developed for the rapid reconstruction of neural…☆77Updated 2 months ago
- Fully Ported to Python from ImageJ's Background Subtractor. Rolling ball and sliding paraboloid background subtraction algorithms.☆51Updated 3 years ago
- A general illumination correction method for optical microscopy.☆42Updated 4 years ago
- ☆21Updated last month
- Compose chunk operators to create a pipeline for local or distributed petabyte-scale computation☆55Updated 7 months ago
- Code and performance tests to demonstrate the COUNTLESS algorithm. https://medium.com/@willsilversmith/countless-high-performance-2x-down…☆10Updated 6 years ago
- Remap, mask, renumber, unique, and in-place transposition of 3D labeled images. Point cloud too.☆63Updated last month
- MAMBA is a mathematical morphology library☆35Updated 8 years ago
- WebGL-based viewer for volumetric data☆24Updated this week
- Volume Slicing and Editing☆33Updated last month
- Training and evaluation scripts for MALA (https://arxiv.org/abs/1709.02974).☆11Updated 4 years ago
- Flood filling networks for segmenting electron microscopy of neural tissue☆25Updated 3 years ago
- Linear and non-linear image registration methods, using scipy and numpy.☆63Updated 13 years ago