Alternatives and similar repositories for nifty

Users that are interested in nifty are comparing it to the libraries listed below

• seung-lab / fill_voids
  Fill holes in binary 2D & 3D images fast.
  ☆28Updated 3 months ago
• jni / skan
  Python module to analyse skeleton (thin object) images
  ☆138Updated 2 months ago
• AdaptiveParticles / LibAPR
  Library for producing and processing on the Adaptive Particle Representation (APR).
  ☆51Updated last week
• seung-lab / neuroglancer
  WebGL-based viewer for volumetric data
  ☆24Updated last week
• william-silversmith / countless
  Code and performance tests to demonstrate the COUNTLESS algorithm. https://medium.com/@willsilversmith/countless-high-performance-2x-down…
  ☆10Updated 6 years ago
• MIDA-group / globalign
  Fast global mutual information-based rigid alignment in the Fourier domain
  ☆32Updated last year
• janelia-flyem / gala
  Automatic segmentation of electron microscopy volumes
  ☆77Updated 4 years ago
• pyimreg / python-register
  Linear and non-linear image registration methods, using scipy and numpy.
  ☆63Updated 12 years ago
• mbalatsko / opencv-rolling-ball
  Fully Ported to Python from ImageJ's Background Subtractor. Rolling ball and sliding paraboloid background subtraction algorithms.
  ☆51Updated 3 years ago
• hbldh / pyefd
  Python implementation of "Elliptic Fourier Features of a Closed Contour"
  ☆93Updated 2 years ago
• seung-lab / fastremap
  Remap, mask, renumber, unique, and in-place transposition of 3D labeled images. Point cloud too.
  ☆63Updated 2 months ago
• abria / TeraStitcher
  A tool for fast automatic 3D-stitching of teravoxel-sized microscopy images
  ☆93Updated last year
• billkarsh / Alignment_Projects
  Aligner for large scale serial section image data
  ☆16Updated 2 years ago
• sciai-lab / mutex-watershed
  The mutex watershed for image segmentation.
  ☆67Updated 4 years ago
• scopetools / cudadecon
  GPU accelerated 3D image deconvolution using CUDA
  ☆39Updated last year
• clEsperanto / clij-opencl-kernels
  ☆20Updated this week
• SuperElastix / SuperElastix
  Official SuperElastix repository
  ☆88Updated 6 years ago
• bobpepin / YacuDecu
  GPU Deconvolution Library with C and Matlab API for nVidia GPUs
  ☆21Updated 6 years ago
• funkelab / gunpowder
  A library to facilitate machine learning on multi-dimensional images.
  ☆86Updated last week
• jni / ray
  Automatic segmentation of electron microscopy volumes
  ☆30Updated 13 years ago
• mritools / cupyimg
  CuPy implementations of image and signal processing functions from NumPy, SciPy and scikit-image
  ☆46Updated 4 years ago
• dtward / image_lddmm_tensorflow
  Image mapping using the LDDMM algorithm, implemented in tensorflow
  ☆17Updated 4 years ago
• nicolasBeucher / mamba-image
  MAMBA is a mathematical morphology library
  ☆35Updated 7 years ago
• maweigert / gputools
  GPU accelerated image/volume processing in Python
  ☆112Updated 7 months ago
• funkey / mala
  Training and evaluation scripts for MALA (https://arxiv.org/abs/1709.02974).
  ☆11Updated 4 years ago
• maweigert / spimagine
  GPU accelerated volume rendering / processing in Python
  ☆119Updated 6 years ago
• constantinpape / heimdall
  Python based viewer for large mulit-dimensional datasets.
  ☆20Updated 5 years ago
• seung-lab / chunkflow
  Compose chunk operators to create a pipeline for local or distributed petabyte-scale computation
  ☆54Updated 5 months ago
• saalfeldlab / render
  Render transformed image tiles
  ☆34Updated last week
• InsightSoftwareConsortium / ITKMontage
  Montaging for microscopy imaging files
  ☆30Updated 3 weeks ago