DerThorsten / niftyLinks
A nifty library for graph based image segmentation.
☆45Updated 2 months ago
Alternatives and similar repositories for nifty
Users that are interested in nifty are comparing it to the libraries listed below
Sorting:
- Automatic segmentation of electron microscopy volumes☆77Updated 4 years ago
- Library for producing and processing on the Adaptive Particle Representation (APR).☆49Updated 3 months ago
- Python module to analyse skeleton (thin object) images☆128Updated last month
- Distributed segmentation for bio-image-analysis☆38Updated 2 months ago
- Fill holes in binary 2D & 3D images fast.☆24Updated last month
- Fast global mutual information-based rigid alignment in the Fourier domain☆32Updated 11 months ago
- KNOSSOS is a software tool for the visualization and annotation of 3D image data and was developed for the rapid reconstruction of neural…☆76Updated last week
- The mutex watershed for image segmentation.☆67Updated 4 years ago
- Flood filling networks for segmenting electron microscopy of neural tissue☆23Updated 2 years ago
- Aligner for large scale serial section image data☆16Updated 2 years ago
- A tool for fast automatic 3D-stitching of teravoxel-sized microscopy images☆85Updated last year
- A library to facilitate machine learning on multi-dimensional images.☆83Updated last week
- GPU accelerated volume rendering / processing in Python☆119Updated 6 years ago
- Fully Ported to Python from ImageJ's Background Subtractor. Rolling ball and sliding paraboloid background subtraction algorithms.☆47Updated 3 years ago
- Remap, mask, renumber, unique, and in-place transposition of 3D labeled images. Point cloud too.☆60Updated last week
- Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.☆49Updated last week
- Compose chunk operators to create a pipeline for local or distributed petabyte-scale computation☆55Updated 3 weeks ago
- pgmLink - A Tracking-by-Assignment Software☆16Updated 8 years ago
- GPU Deconvolution Library with C and Matlab API for nVidia GPUs☆21Updated 6 years ago
- GPU accelerated image/volume processing in Python☆111Updated 2 months ago
- Automatic segmentation of electron microscopy volumes☆31Updated 12 years ago
- A general illumination correction method for optical microscopy.☆41Updated 3 years ago
- Code and performance tests to demonstrate the COUNTLESS algorithm. https://medium.com/@willsilversmith/countless-high-performance-2x-down…☆10Updated 5 years ago
- Render transformed image tiles☆34Updated last week
- GPU accelerated 3D image deconvolution using CUDA☆35Updated 11 months ago
- Python based viewer for large mulit-dimensional datasets.☆20Updated 5 years ago
- WebGL-based viewer for volumetric data☆24Updated last week
- FluoRender is an interactive tool for confocal microscopy data analysis.☆45Updated this week
- ☆17Updated 2 weeks ago
- Training and evaluation scripts for MALA (https://arxiv.org/abs/1709.02974).☆11Updated 4 years ago