Alternatives and similar repositories for dlup:

Users that are interested in dlup are comparing it to the libraries listed below

• NKI-AI / ahcore
  Ahcore is the AI for Oncology core computational pathology toolkit
  ☆15Updated 5 months ago
• DIAGNijmegen / pathology-he-auto-augment
  H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.
  ☆52Updated last year
• Project-MONAI / MetricsReloaded
  ☆82Updated 3 months ago
• navidstuv / NuClick
  Interactive Segmentation of Nucleus
  ☆61Updated 2 years ago
• DIAGNijmegen / pathology-artifact-detection
  Quality control of whole-slide images through multi-class semantic segmentation of artifacts
  ☆30Updated last year
• MaryamHaghighat / PathProfiler
  Pipeline for computational pathology
  ☆34Updated last year
• NKI-AI / hissl
  Histology Self-Supervised Learning
  ☆12Updated 2 years ago
• MIC-DKFZ / patchly
  A grid sampler for larger-than-memory N-dimensional images
  ☆23Updated 8 months ago
• daangeijs / simple_wsi_viewer
  A simple web application for for viewing and navigating pathology whole-slide-images in your browser.
  ☆13Updated last year
• DIAGNijmegen / pathology-hooknet
  ☆57Updated 6 months ago
• CBICA / HistoReg
  Framework for registration of sequential digitized histology slices
  ☆28Updated 3 years ago
• DigitalSlideArchive / HistomicsUI
  A Girder plugin for pathology image annotations and analysis.
  ☆68Updated this week
• haranrk / DigiPathAI
  Tool to visualize gigantic pathology images and use AI to segment cancer cells and present as an overlay
  ☆70Updated 2 months ago
• MIC-DKFZ / BodyPartRegression
  ☆66Updated 11 months ago
• SarderLab / tf-WSI-dataset-utils
  An optimized pipeline for working with Whole Slide Image (WSI) data in Tensorflow
  ☆15Updated 3 years ago
• jopo666 / HistoEncoder
  ☆42Updated 4 months ago
• kaiko-ai / towards_large_pathology_fms
  This repository contains the official implementation of the research paper: "Towards Training Large-Scale Pathology Foundation Models: fr…
  ☆28Updated 2 months ago
• DIAGNijmegen / pathology-streaming-pipeline
  Use streaming to train whole-slides images with single image-level labels, by reducing GPU memory requirements with 99%.
  ☆78Updated 2 years ago
• masadcv / ECONet-MONAILabel
  Official Implementation of ECONet: Efficient Convolutional Online Likelihood Network for Interactive Segmentation
  ☆16Updated 2 years ago
• MWod / ANHIR_MW
  Software used by the AGH team during the ANHIR challenge.
  ☆27Updated 4 years ago
• bhklab / med-imagetools
  Transparent and reproducible medical image processing pipelines in Python.
  ☆45Updated this week
• sara-nl / multi-scale-tools
  ☆18Updated 3 years ago
• andreped / fast-stain-normalization
  GPU-accelerated stain normalization command line tool
  ☆19Updated last year
• alexjfoote / reetoolbox
  Toolbox for measuring adversarial robustness to many transforms
  ☆19Updated 2 years ago
• simongraham / hovernet_inference
  HoVer-Net inference code for simultaneous nuclear segmentation and classification
  ☆66Updated 2 years ago
• computationalpathologygroup / WSICS
  WSICS
  ☆30Updated 5 years ago
• impromptuRong / hd_wsi
  ☆30Updated last week
• pearcetm / svs-deidentifier
  Strip potentially identifying label and macro images from Aperio SVS whole slide image files
  ☆31Updated 11 months ago
• TissueImageAnalytics / iguana
  Interpretable Gland-Graph Networks
  ☆21Updated last year
• mostafajahanifar / nuclick_torch
  Pytorch implementation of NuClick for interactive cell segmentation
  ☆31Updated 11 months ago