Bayesian Inference of Slide-level Confidence via Uncertainty Index Thresholding
☆30Sep 6, 2024Updated 2 years ago
Alternatives and similar repositories for biscuit
Users that are interested in biscuit are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Synthetic histology using GANs, for deep learning model explainability and trainee education.☆16Jan 5, 2024Updated 2 years ago
- ECCV-AIMIA 2022 paper: "Multi-Scale Attention-based Multiple Instance Learning for Classification of Multi-Gigapixel Histology Images"☆14Apr 8, 2023Updated 3 years ago
- Powerful, open-source AI tools for digital pathology.☆376Oct 5, 2026Updated 3 weeks ago
- ☆43Jul 18, 2022Updated 4 years ago
- Quality control of whole-slide images through multi-class semantic segmentation of artifacts☆39Jan 25, 2024Updated 2 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- A tool for training machine-learning models with whole-slide imaging datasets☆26Dec 27, 2023Updated 2 years ago
- Local Temperature Scaling for Probability Calibration☆25Nov 26, 2021Updated 4 years ago
- color/stain normalization on histological images using Reinhard, Macenko and Vahadane methods☆19Dec 14, 2021Updated 4 years ago
- DAS-MIL: Distilling Across Scales for MILClassification of Histological WSIs☆69Nov 29, 2024Updated last year
- Open source whole slide image preparation and viewing pipeline☆14Mar 16, 2020Updated 6 years ago
- Code related to the PANDA challenge on artificial intelligence for Gleason grading☆20Oct 22, 2021Updated 5 years ago
- A Girder plugin for exposing slicer execution model's CLI modules over the web☆18Oct 23, 2026Updated last week
- Ahcore is the AI for Oncology core computational pathology toolkit☆17Oct 3, 2024Updated 2 years ago
- An open-source digital pathology based rapid image annotation tool☆93Oct 28, 2026Updated last week
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Awesome Domain Generalization for Computational Pathology☆26Nov 7, 2024Updated last year
- Code for the paper "Model Agnostic Interpretability for Multiple Instance Learning".☆13Jan 28, 2022Updated 4 years ago
- Variance pooling to incorporate ITH in CPath models - MICCAI 2022☆26Sep 27, 2022Updated 4 years ago
- Implementation of LA_MIL, Local Attention Graph-based Transformer for WSIs, PyTorch☆24Oct 13, 2023Updated 3 years ago
- Use streaming to train whole-slides images with single image-level labels, by reducing GPU memory requirements with 99%.☆79Jan 9, 2023Updated 3 years ago
- Fast, scalable whole-slide tiling☆61Oct 12, 2026Updated 3 weeks ago
- ☆13Nov 15, 2017Updated 8 years ago
- ⚡ Open-source software for deep learning-based digital pathology☆146Jun 14, 2024Updated 2 years ago
- NVIDIA cuCIM - GPU-accelerated image processing library☆472Updated this week
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Multi-omic study of luminal breast cancer☆11Sep 11, 2023Updated 3 years ago
- A Girder plugin for pathology image annotations and analysis.☆80Oct 27, 2026Updated last week
- ☆45Jan 10, 2022Updated 4 years ago
- Intelligent data partitioning using quality control metrics☆18Jun 10, 2025Updated last year
- Tumor classification. TF Slim implementation of Camelyon 16 challenge (WIP)☆22Jan 10, 2021Updated 5 years ago
- CBMIL: Clustering-based Multi-instance Learning Network for Whole Slide Image Classification☆11Mar 5, 2023Updated 3 years ago
- ☆10Oct 29, 2024Updated 2 years ago
- Code and data for MICCAI 2022 accepted paper: Survival Prediction of Brain Cancer with Incomplete Radiology, Pathology, Genomics, and Dem…☆19Mar 13, 2024Updated 2 years ago
- The code of 《M4: Multi-Proxy Multi-Gate Mixture of Experts Network for Multiple Instance Learning in Histopathology Image Analysis》☆14Mar 31, 2025Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- machine-readable information for the TCGA dataset, mirrored from other sources☆23Jun 14, 2022Updated 4 years ago
- ☆62Apr 14, 2025Updated last year
- FOR my learing☆12Feb 19, 2026Updated 8 months ago
- Official implementation of "ScoreNet: Learning Non-Uniform Attention and Augmentation for Transformer-Based Histopathological Image Class…☆12Mar 6, 2023Updated 3 years ago
- a toolbox for manipulation of digital pathology slides and annotations☆18Aug 11, 2020Updated 6 years ago
- ☆17Aug 8, 2022Updated 4 years ago
- Comparative evaluation of image-to-image translation methods for stain transfer in histopathology☆29Feb 14, 2024Updated 2 years ago