Bayesian Inference of Slide-level Confidence via Uncertainty Index Thresholding
☆30Sep 6, 2024Updated last year
Alternatives and similar repositories for biscuit
Users that are interested in biscuit are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Synthetic histology using GANs, for deep learning model explainability and trainee education.☆16Jan 5, 2024Updated 2 years ago
- ECCV-AIMIA 2022 paper: "Multi-Scale Attention-based Multiple Instance Learning for Classification of Multi-Gigapixel Histology Images"☆13Apr 8, 2023Updated 3 years ago
- Powerful, open-source AI tools for digital pathology.☆365May 7, 2026Updated last month
- Quality control of whole-slide images through multi-class semantic segmentation of artifacts☆39Jan 25, 2024Updated 2 years ago
- ☆43Jul 18, 2022Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Open source whole slide image preparation and viewing pipeline☆13Mar 16, 2020Updated 6 years ago
- A tool for training machine-learning models with whole-slide imaging datasets☆26Dec 27, 2023Updated 2 years ago
- H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.☆56Jun 20, 2023Updated 2 years ago
- Awesome Domain Generalization for Computational Pathology☆24Nov 7, 2024Updated last year
- ☆13Nov 15, 2017Updated 8 years ago
- Code related to the PANDA challenge on artificial intelligence for Gleason grading☆19Oct 22, 2021Updated 4 years ago
- Ahcore is the AI for Oncology core computational pathology toolkit☆17Oct 3, 2024Updated last year
- Code for the paper "Model Agnostic Interpretability for Multiple Instance Learning".☆13Jan 28, 2022Updated 4 years ago
- A Girder plugin for exposing slicer execution model's CLI modules over the web☆18Feb 26, 2026Updated 3 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Variance pooling to incorporate ITH in CPath models - MICCAI 2022☆26Sep 27, 2022Updated 3 years ago
- A Girder plugin for pathology image annotations and analysis.☆80Updated this week
- ⚡ Open-source software for deep learning-based digital pathology☆142Jun 14, 2024Updated 2 years ago
- A biologically interpretable integrative deep learning model that integrates PAthological images and GEnomic data☆18Jun 22, 2020Updated 5 years ago
- ☆46Jan 10, 2022Updated 4 years ago
- Pipeline for computational pathology☆41Jan 4, 2024Updated 2 years ago
- ☆59Apr 14, 2025Updated last year
- Code and data for MICCAI 2022 accepted paper: Survival Prediction of Brain Cancer with Incomplete Radiology, Pathology, Genomics, and Dem…☆20Mar 13, 2024Updated 2 years ago
- CBMIL: Clustering-based Multi-instance Learning Network for Whole Slide Image Classification☆11Mar 5, 2023Updated 3 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Python 3 library for the augmentation & normalization of H&E images☆66Sep 12, 2022Updated 3 years ago
- FOR my learing☆12Feb 19, 2026Updated 3 months ago
- a toolbox for manipulation of digital pathology slides and annotations☆19Aug 11, 2020Updated 5 years ago
- Use streaming to train whole-slides images with single image-level labels, by reducing GPU memory requirements with 99%.☆79Jan 9, 2023Updated 3 years ago
- This is the official repository for CardioLab. A machine and deep learning framework for the estimation and monitoring of laboratory abno…☆17Jan 12, 2026Updated 5 months ago
- Fast, scalable whole-slide tiling☆61Jun 7, 2026Updated last week
- Comparative evaluation of image-to-image translation methods for stain transfer in histopathology☆29Feb 14, 2024Updated 2 years ago
- machine-readable information for the TCGA dataset, mirrored from other sources☆23Jun 14, 2022Updated 4 years ago
- ☆17Aug 8, 2022Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Intelligent data partitioning using quality control metrics☆18Jun 10, 2025Updated last year
- Pan-Cancer Integrative Histology-Genomic Analysis via Multimodal Deep Learning - Cancer Cell☆244Feb 7, 2023Updated 3 years ago
- Tumor classification. TF Slim implementation of Camelyon 16 challenge (WIP)☆22Jan 10, 2021Updated 5 years ago
- [ICCV 2023 Oral, IJCV 2025] Multiple Instance Learning Framework with Masked Hard Instance Mining for Whole Slide Image Classification☆97Jan 7, 2026Updated 5 months ago
- convert .kfb format whole slide images to .svs format image for further processing☆17Sep 19, 2020Updated 5 years ago
- Divide-and-Rule: Self-Supervised Learning for Survival Analysis in Colorectal Cancer☆21May 14, 2024Updated 2 years ago
- Official implementation of "ScoreNet: Learning Non-Uniform Attention and Augmentation for Transformer-Based Histopathological Image Class…☆12Mar 6, 2023Updated 3 years ago