Alternatives and similar repositories for biscuit

Users that are interested in biscuit are comparing it to the libraries listed below

• georg-wolflein / good-features
  Official code for the paper "A Good Feature Extractor Is All You Need for Weakly Supervised Pathology Slide Classification"
  ☆18Updated last year
• KatherLab / preProcessing
  ☆45Updated 2 years ago
• sebastianffx / stainlib
  Python 3 library for the augmentation & normalization of H&E images
  ☆58Updated 2 years ago
• mahmoodlab / CRANE
  Deep learning enabled assessment of cardiac allograft rejection from endomyocardial biopsies- Nature Medicine
  ☆32Updated 3 years ago
• KatherLab / end2end-WSI-preprocessing
  End-to-end pipeline to go from raw H&E slides to normalised extracted features for training
  ☆27Updated last year
• mahmoodlab / varpool
  Variance pooling to incorporate ITH in CPath models - MICCAI 2022
  ☆26Updated 2 years ago
• jopo666 / HistoPrep
  Preprocessing module for large histological images
  ☆20Updated 2 years ago
• DIAGNijmegen / pathology-he-auto-augment
  H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.
  ☆57Updated 2 years ago
• PathologyDataScience / NuCLS
  NuCLS: A scalable crowdsourcing, deep learning approach and dataset for nucleus classification, localization and segmentation
  ☆54Updated 3 years ago
• yfzon / Multi-modal-Multi-instance-Learning
  ☆28Updated 3 years ago
• andreped / fast-stain-normalization
  GPU-accelerated stain normalization command line tool
  ☆22Updated last year
• stanfordmlgroup / DLBCL-Morph
  DLBCL-Morph dataset containing high resolution tissue microarray scans from 209 DLBCL cases, with geometric features computed using deep …
  ☆37Updated 4 years ago
• histocartography / seg-gini
  SEGmentation using Graphs with Inexact aNd Incomplete labels
  ☆23Updated 3 years ago
• vqdang / H2T
  ☆35Updated 2 years ago
• kevindehaan / stain-transformation
  ☆42Updated 3 years ago
• histocartography / hact-net
  ☆70Updated 4 years ago
• alexjfoote / reetoolbox
  Toolbox for measuring adversarial robustness to many transforms
  ☆19Updated 4 months ago
• TissueImageAnalytics / CoNIC
  CoNIC Challenge
  ☆66Updated last year
• MarvinLer / SparseConvMIL
  Sparse Convolutional Context-Aware Multiple Instance Learning for Whole Slide Image Classification | https://arxiv.org/abs/2105.02726
  ☆25Updated 3 years ago
• mdsatria / MultiAttentionMIL
  ECCV-AIMIA 2022 paper: "Multi-Scale Attention-based Multiple Instance Learning for Classification of Multi-Gigapixel Histology Images"
  ☆12Updated 2 years ago
• KatherLab / HIA
  Histopathology Image Analysis
  ☆92Updated 2 years ago
• clemsgrs / hs2p
  Histopathology Slides Preprocessing Pipeline
  ☆42Updated 5 months ago
• lucasrla / wsi-preprocessing
  Simple library for preprocessing histopathological whole-slide images (WSI) into tiles (a.k.a. patches) towards deep learning
  ☆55Updated last year
• sinai-computational-pathology / CPath_SABenchmark
  ☆14Updated last year
• adamshephard / TIAger
  ☆20Updated 2 years ago
• wenqi006 / SlideGraph
  ☆56Updated 3 years ago
• mahmoodlab / MADELEINE
  MADELEINE: multi-stain slide representation learning (ECCV'24)
  ☆58Updated 6 months ago
• DIAGNijmegen / panda-challenge
  Code related to the PANDA challenge on artificial intelligence for Gleason grading
  ☆18Updated 3 years ago
• nadeemlab / ImPartial
  Interactive deep learning whole-cell segmentation and thresholding using partial annotations
  ☆38Updated 2 months ago
• DIAGNijmegen / pathology-artifact-detection
  Quality control of whole-slide images through multi-class semantic segmentation of artifacts
  ☆36Updated last year