☆11Apr 13, 2026Updated this week
Alternatives and similar repositories for cfa-viral-lineage-model
Users that are interested in cfa-viral-lineage-model are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆13Apr 10, 2026Updated last week
- ☆10Feb 9, 2026Updated 2 months ago
- Python package for multi-signal Bayesian renewal modeling with JAX and NumPyro.☆27Updated this week
- R package for real-time Rt estimation with penalized splines☆15Jan 12, 2026Updated 3 months ago
- Wastewater-informed COVID-19 forecasting models submitted to the COVID-19 Forecast Hub☆51Apr 8, 2026Updated last week
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A repository to store COVID-19 variant nowcasts collected as a modeling hub.☆21Updated this week
- ☆23Jun 6, 2025Updated 10 months ago
- Course on nowcasting and forecasting of infectious disease dynamics☆23Mar 2, 2026Updated last month
- Real-Time Use of a Dynamic Model to Measure the Impact of Public Health Interventions on Measles Outbreak Size and Duration — Chicago, Il…☆17Oct 31, 2024Updated last year
- Tools for evolutionary forecasting☆14Feb 9, 2026Updated 2 months ago
- Tools for basic signal processing in epidemiology☆12Apr 9, 2026Updated last week
- Estimate epidemiological delay distributions with brms☆15Updated this week
- ☆20Apr 10, 2026Updated last week
- Additional censored event tools for Distributions.jl☆14Mar 31, 2026Updated 2 weeks ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- A repository run by the Centers for Disease Control and Prevention (CDC) to collect forecasts of incident respiratory COVID-19 hospital a…☆24Updated this week
- Nowcasting by Bayesian Smoothing☆18May 14, 2025Updated 11 months ago
- An in-development R package and a Bayesian hierarchical model jointly fitting multiple "local" wastewater data streams and "global" case …☆29Mar 9, 2026Updated last month
- Models and infrastructure for forecasting respiratory disease hospitalizations using wastewater data with PyRenew.☆16Updated this week
- ☆58Apr 10, 2026Updated last week
- ☆33Mar 23, 2026Updated 3 weeks ago
- Process very large Stan models efficiently☆14Dec 5, 2025Updated 4 months ago
- Bayesian spatio-temporal methods for small-area estimation of HIV indicators (PhD thesis, Imperial College London, 2023)☆16Nov 11, 2025Updated 5 months ago
- An R package to help assess the sensitivity of a Bayesian model (fitted with Stan) to the specification of its likelihood and priors☆11Apr 8, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Applied category theory applied to epidemiological models☆12Aug 7, 2024Updated last year
- Code to test Rt estimates against synthetic data☆18Nov 30, 2020Updated 5 years ago
- A modular Bayesian framework for real-time infectious disease surveillance. Provides tools for nowcasting, reproduction number estimation…☆63Updated this week
- R code to replicate analyses in Clark et al 2025 (Beyond single-species models: leveraging multispecies forecasts to navigate the dynamic…☆15Feb 19, 2025Updated last year
- Tools for building predictive models in epidemiology.☆17Sep 19, 2025Updated 6 months ago
- ☆10Sep 30, 2025Updated 6 months ago
- Utilities for Scoring and Assessing Predictions☆61Apr 8, 2026Updated last week
- Utility provides a more meaningful measure of forecast skill than goodness-of-fit☆18Apr 26, 2022Updated 3 years ago
- Excess deaths due to COVID-19 pandemic in 2020☆11Jan 27, 2022Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Bayesian Modelling in Epidemiology Case Line Lists☆14Oct 7, 2025Updated 6 months ago
- Infectious disease model library and utilities☆15Sep 2, 2022Updated 3 years ago
- ☆11Dec 19, 2024Updated last year
- Repository to the R package nowcaster, nowcasting with INLA☆23Sep 20, 2025Updated 6 months ago
- An R package for Bayes Linear emulation and history matching.☆18Dec 1, 2025Updated 4 months ago
- Easily combine predictions from multiple Bayesian models using techniques including (pseudo) Bayesian model averaging, hierarchical stack…☆36Dec 19, 2025Updated 3 months ago
- A Julia package for random variables, some transformations and probabilities☆22Jan 2, 2023Updated 3 years ago