CDCgov / cfa-epinow2-pipelineLinks
☆12Updated this week
Alternatives and similar repositories for cfa-epinow2-pipeline
Users that are interested in cfa-epinow2-pipeline are comparing it to the libraries listed below
Sorting:
- ☆10Updated last month
- ☆19Updated this week
- ☆11Updated this week
- R package for real-time Rt estimation with penalized splines☆14Updated 3 weeks ago
- Real-Time Use of a Dynamic Model to Measure the Impact of Public Health Interventions on Measles Outbreak Size and Duration — Chicago, Il…☆16Updated last year
- A repository to store COVID-19 variant nowcasts collected as a modeling hub.☆19Updated this week
- Models and infrastructure for forecasting respiratory disease hospitalizations using wastewater data with PyRenew.☆16Updated this week
- Data and statistical models for biomarker shedding.☆15Updated last week
- ☆10Updated 3 months ago
- Course on nowcasting and forecasting of infectious disease dynamics☆22Updated last week
- Estimate epidemiological delay distributions with brms☆15Updated 3 weeks ago
- An in-development R package and a Bayesian hierarchical model jointly fitting multiple "local" wastewater data streams and "global" case …☆27Updated this week
- ☆22Updated 7 months ago
- Additional censored event tools for Distributions.jl☆13Updated last month
- An R package and Bayesian generative model to estimate epidemiological parameters from wastewater concentration measurements over time.☆23Updated this week
- A modular Bayesian framework for real-time infectious disease surveillance. Provides tools for nowcasting, reproduction number estimation…☆62Updated last week
- US RSV Forecast Hub☆12Updated last week
- Utilities for Scoring and Assessing Predictions☆60Updated 3 weeks ago
- ☆32Updated last month
- Create Contact Matrices from Population Data☆20Updated this week
- Materials for the course on Bayesian model building run at Second Faculty of Medicine at Charles University in Prague☆11Updated last year
- Bayesian spatio-temporal methods for small-area estimation of HIV indicators (PhD thesis, Imperial College London, 2023)☆16Updated 2 months ago
- Code of PriorVAE: encoding spatial priors with variational autoencoders☆12Updated 2 years ago
- Optimised estimates of reproduction numbers over time, which extract more information from an incidence curve than many conventional appr…☆22Updated 2 years ago
- Python package for multi-signal Bayesian renewal modeling with JAX and NumPyro.☆23Updated this week
- An R package for Bayes Linear emulation and history matching.☆17Updated last month
- Monitor MCMC runs in the browser☆38Updated last year
- Repository to the R package nowcaster, nowcasting with INLA☆22Updated 3 months ago
- Code for the talk "Approximate Bayesian inference for latent Gaussian models in Stan"☆13Updated 3 years ago
- Data and code to support Barnard et al., Modelling the medium-term dynamics of SARS-CoV-2 transmission in England in the Omicron era, Nat…☆12Updated 3 years ago