CDCgov / covid19-forecast-hubLinks
A repository run by the US CDC to collect forecasts of incident COVID-19 hospital admissions and emergency department visits.
☆22Updated this week
Alternatives and similar repositories for covid19-forecast-hub
Users that are interested in covid19-forecast-hub are comparing it to the libraries listed below
Sorting:
- ☆49Updated this week
- Wastewater-informed COVID-19 forecasting models submitted to the COVID-19 Forecast Hub☆50Updated this week
- An in-development R package and a Bayesian hierarchical model jointly fitting multiple "local" wastewater data streams and "global" case …☆27Updated 2 weeks ago
- Models and infrastructure for forecasting respiratory disease hospitalizations using wastewater data with PyRenew.☆16Updated last week
- ☆19Updated last week
- R package for real-time Rt estimation with penalized splines☆15Updated last week
- Disease outbreak reconstruction from epidemiological and genetic data☆35Updated last month
- Estimate Realtime Case Counts and Time-varying Epidemiological Parameters☆133Updated this week
- ☆13Updated last week
- ☆19Updated 2 months ago
- R package to access the genomics and epidemiology data and Research Library metadata compiled and standardized on outbreak.info.☆21Updated 2 years ago
- Code to test Rt estimates against synthetic data☆18Updated 5 years ago
- Model information for https://www.cdc.gov/coronavirus/2019-ncov/covid-data/forecasting-us.html☆28Updated 2 years ago
- Code and Data for Advancing real-time infectious disease forecasting using large language models☆51Updated 6 months ago
- Estimate growth rate advantage of SARS-CoV2 variants of concern based on international genomic surveillance data and multinomial spline f…☆25Updated 2 years ago
- R package for statistical inference of spatiotemporal partially observed Markov processes☆11Updated last year
- Flu Scenario Modeling Hub☆12Updated 8 months ago
- ☆39Updated last year
- An R package and Bayesian generative model to estimate epidemiological parameters from wastewater concentration measurements over time.☆23Updated this week
- A repository to store COVID-19 variant nowcasts collected as a modeling hub.☆19Updated last week
- Tools for evolutionary forecasting☆14Updated 4 months ago
- Conditional Auto-Regressive LASSO in R☆20Updated 3 years ago
- Analysis of EBOV genome sequence from Guinea, Sierra Leone and Liberia from 2014-2016☆60Updated 7 years ago
- Inferring high-resolution human mixing patterns for disease modeling☆48Updated 3 years ago
- Pathogen evolution, selection and immunity☆45Updated last year
- Optimised estimates of reproduction numbers over time, which extract more information from an incidence curve than many conventional appr…☆22Updated 2 years ago
- FluSight Forecast Submissions☆19Updated last year
- ☆27Updated 6 months ago
- ☆10Updated last month
- Utilities and distributions for (birth-death) skyline models.☆10Updated 6 years ago