Alternatives and similar repositories for MALDIquant:

Users that are interested in MALDIquant are comparing it to the libraries listed below

• ipb-halle / MetFragR
  R package for MetFrag
  ☆24Updated 7 years ago
• jpquast / protti
  Picotti lab data analysis package.
  ☆61Updated last month
• rformassspectrometry / metaRbolomics-book
  The MetaRbolomics book. A review of R packages in BioC, CRAN, gitlab and github.
  ☆33Updated 3 years ago
• barupal / ChemRICH
  Chemical Similarity Enrichment analysis of metabolomics datasets
  ☆27Updated 7 months ago
• jaspershen / metID
  Construct database and identify metabolites.
  ☆5Updated 2 years ago
• sneumann / mzR
  This is the git repository matching the Bioconductor package mzR: parser for netCDF, mzXML, mzData and mzML files (mass spectrometry data…
  ☆44Updated last week
• jorainer / metabolomics2018
  Workshop illustrating mass spectrometry data analysis in R and use of the updated xcms functionality for the preprocessing of LC-MS data.
  ☆26Updated last year
• pmartR / pmartR
  The pmartR R package provides functionality for quality control, normalization, exploratory data analysis, and statistical analysis of ma…
  ☆38Updated last week
• sgibb / MALDIquantExamples
  Some examples to analyze mass spectrometry data using MALDIquant
  ☆15Updated 2 years ago
• pnnl / leapR
  ☆17Updated 2 months ago
• jaspershen / MetNormalizer
  MetNormalizer is used to normalize large scale metabolomics data.
  ☆20Updated 3 years ago
• shuzhao-li-lab / espol-workshop
  5-day workshop on Metabolomics and Data Analysis
  ☆16Updated 5 years ago
• stanstrup / commonMZ
  A collection of common mz values found in mass spectrometry.
  ☆19Updated 8 months ago
• RASpicer / MetabolomicsTools
  ☆55Updated 3 years ago
• phenomecentre / peakPantheR
  On-instrument and post-acquisition targeted feature extraction
  ☆12Updated 8 months ago
• rformassspectrometry / QFeatures
  Quantitative features for mass spectrometry data
  ☆26Updated last week
• pattilab / DecoID
  Metabolomics software for database-assisted deconvolution of MS/MS spectra
  ☆18Updated last year
• WandeRum / MVI-evaluation
  Missing value imputation and evaluation, especially for metabolomics data sets
  ☆18Updated 6 years ago
• MatteoLacki / timsr
  TimsR: Easy access to timsTOF Pro data from R.
  ☆9Updated 3 years ago
• shuzhao-li / mummichog
  pathway and network analysis for metabolomics
  ☆40Updated 8 months ago
• cbroeckl / RAMClustR
  Assigning precursor-product ion relationships in indiscriminant MS/MS data
  ☆12Updated 8 months ago
• RogerGinBer / RHermes
  RHermes is a semi-targeted metabolomics package to deeply characterize biological and environmental samples.
  ☆25Updated last year
• rformassspectrometry / MsCoreUtils
  Core Utils for Mass Spectrometry Data
  ☆16Updated 4 months ago
• MASHUOA / HiTMaP
  An R package of High-resolution Informatics Toolbox for Maldi-imaging Proteomics
  ☆18Updated last week
• Viant-Metabolomics / Galaxy-M
  Metabolomics Tools for Galaxy
  ☆21Updated 8 years ago
• mjhelf / Metaboseek
  Interactive software to analyze and browse mass spectrometry data
  ☆21Updated last year
• vsegurar / DeepMSPeptide
  ☆16Updated 5 years ago
• DorresteinLaboratory / XCMS3_FeatureBasedMN
  ☆12Updated 2 years ago
• ahmohamed / lipidr
  Data Mining and Analysis of Lipidomics datasets in R
  ☆29Updated last year
• jorainer / SpectraTutorials
  These workshops and tutorials provide use cases and examples for mass spectrometry data handling and analysis using the Spectra Bioconduc…
  ☆19Updated 6 months ago