Alternatives and similar repositories for MALDIquant

Users that are interested in MALDIquant are comparing it to the libraries listed below

• rformassspectrometry / metaRbolomics-book
  The MetaRbolomics book. A review of R packages in BioC, CRAN, gitlab and github.
  ☆33Updated 4 years ago
• ipb-halle / MetFragR
  R package for MetFrag
  ☆24Updated 7 years ago
• pmartR / pmartR
  The pmartR R package provides functionality for quality control, normalization, exploratory data analysis, and statistical analysis of ma…
  ☆43Updated last week
• barupal / ChemRICH
  Chemical Similarity Enrichment analysis of metabolomics datasets
  ☆29Updated 11 months ago
• jpquast / protti
  Picotti lab data analysis package.
  ☆62Updated 3 months ago
• sneumann / mzR
  This is the git repository matching the Bioconductor package mzR: parser for netCDF, mzXML, mzData and mzML files (mass spectrometry data…
  ☆45Updated 5 months ago
• sgibb / MALDIquantExamples
  Some examples to analyze mass spectrometry data using MALDIquant
  ☆16Updated 2 years ago
• cbroeckl / RAMClustR
  Assigning precursor-product ion relationships in indiscriminant MS/MS data
  ☆14Updated this week
• jaspershen / MetNormalizer
  MetNormalizer is used to normalize large scale metabolomics data.
  ☆22Updated 4 years ago
• eMetaboHUB / MS-CleanR
  ☆25Updated last year
• fgcz / rawrr
  Access Orbitrap data in R lang using C# .NET assembly - bioconductor package
  ☆57Updated last week
• jaspershen / metID
  Construct database and identify metabolites.
  ☆6Updated 2 years ago
• RASpicer / MetabolomicsTools
  ☆55Updated 4 years ago
• wilsontom / msconverteR
  Create .mzML files through the R Console
  ☆11Updated 3 years ago
• LiChenPU / NetID
  A global network optimization approach for untargeted LC-MS metabolomics data annotation and metabolite discovery
  ☆46Updated last year
• xia-lab / OptiLCMS
  R package for optimized LC-MS spectra processing
  ☆25Updated 2 months ago
• Nextflow4Metabolomics / nextflow4ms-dial
  Nextflow-powered MS-DIAL
  ☆10Updated 6 months ago
• zmahnoor14 / MAW
  Metabolome Annotation Workflow
  ☆25Updated last year
• WMBEdmands / MetMSLine
  R functions for automation of biomarker discovery based on processing downstream of large LC-MS datasets from any peak picking software
  ☆10Updated 8 years ago
• dgrapov / CTSgetR
  R interface to Chemical Translation Service (CTS)
  ☆15Updated 11 months ago
• shuzhao-li / mummichog
  pathway and network analysis for metabolomics
  ☆42Updated last year
• alexandrovteam / curatr
  ☆14Updated 2 years ago
• cpanse / protViz
  Visualizing and Analyzing Mass Spectrometry Related Data in Proteomics
  ☆11Updated last month
• jorainer / metabolomics2018
  Workshop illustrating mass spectrometry data analysis in R and use of the updated xcms functionality for the preprocessing of LC-MS data.
  ☆28Updated 2 years ago
• nanxstats / protr
  🧬 Toolkit for generating various numerical features of protein sequences
  ☆52Updated 9 months ago
• rickhelmus / patRoon
  Workflow solutions for mass-spectrometry based non-target analysis.
  ☆65Updated this week
• lgatto / MSnbase
  Base Classes and Functions for Mass Spectrometry and Proteomics
  ☆134Updated 3 months ago
• MatteoLacki / timsr
  TimsR: Easy access to timsTOF Pro data from R.
  ☆10Updated 4 years ago
• ncats / RaMP-DB
  ☆34Updated 3 weeks ago
• SimonSchlumbohm / HarmonizR
  ☆16Updated 2 years ago