BikLab / BITMaB2-TutorialsLinks
Workshop materials for the Second Benthic Invertebrates, Metagenomics, and Bioinformatics Workshop at the TAMUCC Harte Institute in Corpus Christi, TX (January 15-19, 2018)
☆22Updated 7 years ago
Alternatives and similar repositories for BITMaB2-Tutorials
Users that are interested in BITMaB2-Tutorials are comparing it to the libraries listed below
Sorting:
- ☆18Updated 6 years ago
- ☆41Updated 4 years ago
- Amplicon sequencing pipelines suitable for SSU (16S, 18S), LSU (23S, 28S) and ITS.☆54Updated last week
- Course materials for the Genomics Aotearoa Metagenomics Summer School, to be hosted at the University of Auckland in Septermber☆60Updated 9 months ago
- Statistical analysis for sparse high-throughput sequencing☆69Updated 6 months ago
- Snakemake workflow for metagenomic classification with Kraken2☆65Updated 2 years ago
- An R package designed for drawing gene arrow maps☆79Updated last week
- Bash pipeline for analysis of ONT full-length 16S sequences in QIIME2☆30Updated 5 years ago
- PanPhlAn is a strain-level metagenomic profiling tool for identifying the gene composition of individual strains in metagenomic samples☆45Updated last year
- HoCoRT - Remove specific organisms from sequencing reads☆16Updated 5 months ago
- Micro 612 genomics workshop☆37Updated 4 years ago
- A tool for generating bacterial genomes from metagenomes with nanopore long read sequencing☆70Updated 3 years ago
- Reproducible Analyses accompanying DADA2 + PacBio Manuscript☆32Updated 4 years ago
- Metagenomics Workshop☆28Updated 8 years ago
- Computational workflows for metagenomics tasks, by the Bhatt lab☆47Updated 2 years ago
- MaAsLin3: Microbiome Multivariate Association with Linear Models☆37Updated last week
- Snakemake pipeline for downstream analysis of metagenome-assembled genomes (MAGs) (pronounced mag-pie)☆62Updated 2 years ago
- Analysis of metagenomic shotgun sequences including assembly, speciation, ARG discovery and more☆32Updated 2 years ago
- MicrobeCensus estimates the average genome size of microbial communities from metagenomic data☆46Updated 5 years ago
- Metagenomics-related extended functionalities to samtools☆21Updated last year
- FlexTaxD (Flexible Taxonomy Databases) - Create, add, merge different taxonomy sources (QIIME, GTDB, NCBI and more) and create metagenomi…☆66Updated 3 months ago
- ☆23Updated 6 years ago
- Analysing Metagenomic Species (MGS)☆41Updated 4 years ago
- CGView is a Java package for generating high-quality, zoomable maps of circular genomes.☆44Updated 11 months ago
- Pipeline for Reproducible and Scalable Integration of Metagenomic and Metatranscriptomic Data☆14Updated 3 weeks ago
- All of my various bioinformatic scripts fit for public consumption (loosely defining "fit")☆74Updated 2 years ago
- PATO is a R package designed to analyze pangenomes (set of genomes) intra or inter species.☆58Updated last year
- SHallow shOtGUN profiler☆54Updated 3 years ago
- de.NBI Nanopore Training Course☆20Updated 2 weeks ago
- Automated pipeline for analyses of fungal ITS from the Illumina☆31Updated last month