Alternatives and similar repositories for PolyFold:

Users that are interested in PolyFold are comparing it to the libraries listed below

• thuxugang / opus_fold
  OPUS-Fold: An Open-Source Protein Folding Framework Based on Torsion-Angle Sampling
  ☆21Updated 4 years ago
• lucidrains / tr-rosetta-pytorch
  Implementation of trRosetta and trDesign for Pytorch, made into a convenient package, for protein structure prediction and design
  ☆81Updated 3 years ago
• zhanghaicang / DeepFolding
  Protein contacts prediction using deep learning models
  ☆77Updated 5 years ago
• JinLi711 / UTGN
  Universal Transforming Geometric Network for protein structure prediction.
  ☆8Updated 4 years ago
• sokrypton / af_backprop
  ☆36Updated 6 months ago
• psipred / DMPfold
  De novo protein structure prediction using iteratively predicted structural constraints
  ☆57Updated 3 years ago
• lucidrains / neural-plexer-pytorch
  Implementation of Nvidia's NeuralPlexer, for end-to-end differentiable design of functional small-molecules and ligand-binding proteins, …
  ☆50Updated last year
• deepchem / deepdock
  An experimental package for deep learning for molecular docking
  ☆20Updated 5 years ago
• Learn-Ventures / trdesign-pytorch
  pytorch implementation of trDesign
  ☆45Updated 4 years ago
• tekpinar / correlationplus
  A Python package to calculate, visualize and analyze correlation maps of proteins.
  ☆41Updated last month
• lupoglaz / DeepLocalProteinDocking
  Learning protein representation for rigid-body docking
  ☆22Updated 5 years ago
• ShahidIqb / PROST
  A tool for predicting the effects of missense mutations on protein stability changes upon missense mutation using protein sequence only. …
  ☆22Updated last year
• leeyang / ResPRE
  ResPRE is an algorithm for protein residue-residue contact-map prediction
  ☆21Updated 5 years ago
• DeepGraphLearning / DiffPack
  Implementation of DiffPack: A Torsional Diffusion Model for Autoregressive Protein Side-Chain Packing
  ☆85Updated last year
• ardagoreci / Chroma
  Chroma Protein Diffusion Model
  ☆10Updated last year
• IBM / fold2seq
  Code for Fold2Seq paper from ICML 2021
  ☆50Updated 2 years ago
• THU-gonglab / AmoebaContact
  AmoebaContact is a program for multi-cutoff protein contact prediction which starts from target sequence alone. Different from traditiona…
  ☆9Updated 5 years ago
• xinformatics / alphafold
  Open source code for AlphaFold to extract protein embeddings
  ☆26Updated 3 years ago
• shuyu-wang / ProS-GNN
  ☆10Updated 3 years ago
• jproney / AF2Rank
  ☆102Updated 2 years ago
• ProteinDesignLab / protein_seq_des
  Code for our paper "Protein sequence design with a learned potential"
  ☆79Updated last year
• Genentech / equifold
  Official code repository for EquiFold: Protein Structure Prediction with a Novel Coarse-Grained Structure Representation
  ☆121Updated 2 years ago
• clami66 / dgram2dmap
  Converts AlphaFold distograms into distance matrices and saves them into a number of formats
  ☆12Updated 2 years ago
• jscant / PointVS
  SE(3)-equivariant point cloud networks for virtual screening
  ☆20Updated last year
• aqlaboratory / pnerf
  ☆35Updated 5 years ago
• ba-lab / pdnet
  PDNET: A fully open-source framework for deep learning protein real-valued distances
  ☆35Updated 3 years ago
• PointSite / PointSite
  PointSite: a point cloud segmentation tool for identification of protein ligand binding atoms
  ☆55Updated 2 years ago
• sokrypton / GREMLIN_CPP
  GREMLIN - learn MRF/potts model from input multiple sequence alignment! Implementation now available in C++ and Tensorflow/Python!
  ☆53Updated 2 years ago
• jafetgado / ThermoProt
  Predict protein thermostability with ML
  ☆18Updated 8 months ago
• Graylab / deepH3-distances-orientations
  ☆34Updated 3 years ago