A Python package to calculate, visualize and analyze correlation maps of proteins.
☆44Apr 2, 2026Updated last week
Alternatives and similar repositories for correlationplus
Users that are interested in correlationplus are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Tool suite for analysing molecular dynamics trajectories using network analysis and PRS☆53May 30, 2025Updated 10 months ago
- Robust and stable clustering of molecular dynamics simulation trajectories.☆19Sep 2, 2022Updated 3 years ago
- PCA and normal mode analysis of proteins☆20May 16, 2024Updated last year
- mdciao: Accessible Analysis and Visualization of Molecular Dynamics Simulation Data☆40Mar 19, 2026Updated 3 weeks ago
- Software for the prediction of DEER and PRE data from conformational ensembles.☆14May 6, 2025Updated 11 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- InteractionDrawer is a JavaScript library for the drawing of highly interactive 2D ligand interaction diagrams.☆27Oct 16, 2023Updated 2 years ago
- Set of tools for input preparation for conserved water search from MD trajectories (gromacs, amber) and their analysis☆18Mar 30, 2026Updated last week
- Generate and perturb protein structural ensembles using the ExProSE algorithm☆23Oct 23, 2024Updated last year
- EXPRORER: Rational cosolvents set construction method for cosolvent molecular dynamics (CMD) with large-scale computation☆11Jul 28, 2022Updated 3 years ago
- A command line application to launch molecular dynamics simulations with OpenMM☆40Apr 7, 2022Updated 4 years ago
- pKAI: a fast and interpretable deep learning approach to accurate electrostatics-driven pKa prediction☆31Sep 16, 2021Updated 4 years ago
- This repo contains the collection of codes to find designer interfacial mutations☆17Sep 4, 2023Updated 2 years ago
- A python module to plot secondary structure schemes☆26Mar 18, 2026Updated 3 weeks ago
- Python module for identification of conserved water molecules from molecular dynamics trajectories.☆14Apr 1, 2026Updated last week
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Python Tools for NAMD☆24May 7, 2025Updated 11 months ago
- This repo contains the codes to run solvation free energy prediction.☆12May 1, 2022Updated 3 years ago
- Efficient Sampling of PROTAC-Induced Ternary Complexes☆12Jun 3, 2025Updated 10 months ago
- Easy to get started with molecular dynamics simulation.☆65Jun 11, 2025Updated 9 months ago
- Accelerated sampling framework with autoencoder-based method☆23Sep 7, 2019Updated 6 years ago
- ☆21Dec 11, 2024Updated last year
- DynamiSpectra: Decode molecular motion with precision and power☆20Sep 16, 2025Updated 6 months ago
- a VMD plugin for binding affinity prediction using end-point free energy methods☆28Apr 23, 2016Updated 9 years ago
- A Gene Finder framework for Julia.☆16Jan 16, 2026Updated 2 months ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Fast PBC wrapping and unwrapping for VMD☆25Nov 25, 2024Updated last year
- // PROJECT PAUSED FOR NOW (lack of capacity) // Protein cavity identification and automatic subpocket decomposition☆45Jul 23, 2023Updated 2 years ago
- clusterize molecular dynamic trajectories (amber, gromacs, charmm, namd, pdb...)☆127Apr 25, 2024Updated last year
- 💊 Cutting-edge automation of computational drug discovery pipelines☆31Jul 24, 2025Updated 8 months ago
- ☆10Updated this week
- ☆12Jan 27, 2025Updated last year
- MD pharmacophores and virtual screening☆34Dec 15, 2023Updated 2 years ago
- App for serotonergic targets☆12Jan 8, 2026Updated 3 months ago
- Wrapper to protein secondary structure calculation packages☆13Apr 3, 2025Updated last year
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Multiscale Simulation Tool for Backmapping☆22Mar 13, 2026Updated 3 weeks ago
- Standalone charge assignment from Espaloma framework.☆47Oct 10, 2025Updated 5 months ago
- fpocket is a very fast open source protein pocket detection algorithm based on Voronoi tessellation. The platform is suited for the scien…☆457Mar 9, 2026Updated last month
- ☆71Jul 19, 2023Updated 2 years ago
- easyPARM is a computational tool developed to simplify the derivation of force field parameters for metal-containing molecular systems an…☆36Mar 12, 2026Updated 3 weeks ago
- WebGL based molecular viewer☆36Mar 9, 2026Updated last month
- NAMD QM/MM Tutorial on Free Energy Profile of Reaction Mechanisms☆15Sep 14, 2018Updated 7 years ago