Scripts related to building major-allele references for Bowtie and Bowtie 2
☆13Jun 3, 2021Updated 4 years ago
Alternatives and similar repositories for bowtie-majref
Users that are interested in bowtie-majref are comparing it to the libraries listed below
Sorting:
- Pan-Genomic Matching Statistics☆55Apr 3, 2024Updated last year
- ☆20Oct 24, 2023Updated 2 years ago
- Somatic (mosaic) SNV caller for 10X Genomics data using random forest classification and feature-based filters☆23Apr 1, 2019Updated 6 years ago
- More realistic simulator for genomic DNA sequences from Illumina machines that achieves a similar k-mer spectrum as the original☆51Aug 17, 2022Updated 3 years ago
- ☆12Oct 29, 2025Updated 4 months ago
- Lift-over alignments from variant-aware references☆34Mar 4, 2023Updated 3 years ago
- My R scripts, primarily R plotting scripts + some genomics software including 16S rRNA metataxnomics and RNAseq☆12Dec 19, 2022Updated 3 years ago
- ☆13May 3, 2024Updated last year
- An interactive exploration/visualization platform to help you lift the fog from your CRISPR analyses.☆12Nov 12, 2025Updated 3 months ago
- An R package for the processing of plate reader and flow cytometry data. This includes: normalisation and calibration of plate reader dat…☆10Aug 12, 2025Updated 6 months ago
- Python pipeline and Javascript scatter plot library for single-cell datasets, http://cellbrowser.rtfd.org☆13Updated this week
- Automatically exported from code.google.com/p/malder☆11Mar 17, 2015Updated 10 years ago
- Here you can find the scripts we used in our tutorial "Falling in love with R". You can look for them in our Youtube or Facebook page: Wi…☆12May 13, 2022Updated 3 years ago
- Gene expression viewer template☆11Aug 30, 2017Updated 8 years ago
- bioInfograph: an online tool to design and display multi-panel scientific figure interactively☆12Feb 15, 2022Updated 4 years ago
- ☆11Feb 16, 2021Updated 5 years ago
- ☆10Oct 18, 2021Updated 4 years ago
- K-means clustering for large single-cell datasets☆12Feb 10, 2026Updated last month
- TQSLE v1.0 released☆10Aug 29, 2023Updated 2 years ago
- MONSDA, Modular Organizer of Nextflow and Snakemake driven hts Data Analysis☆12Feb 16, 2026Updated 3 weeks ago
- Utility functions for weights and biases (wandb).☆11Sep 17, 2024Updated last year
- ☆10Sep 4, 2024Updated last year
- ☆10Apr 30, 2019Updated 6 years ago
- Code repository for R Data Mining Blueprints, published by Packt☆10Jan 14, 2021Updated 5 years ago
- ☆10May 15, 2018Updated 7 years ago
- Generate a Latex Timetable Based on Calendar ics File☆12Feb 26, 2020Updated 6 years ago
- Multilayer modelling of the human transcriptome and biological mechanisms of complex diseases and traits☆11Jun 2, 2021Updated 4 years ago
- Namespace encoding hierarchical relationships between proteins, protein families, and protein complexes.☆12Mar 9, 2021Updated 5 years ago
- ☆15Mar 13, 2024Updated last year
- Analyze CRISPR and shRNA functional genetic screening data☆12Dec 1, 2025Updated 3 months ago
- ☆10Jan 27, 2025Updated last year
- Impute DNA methylation from WGBS data.☆11Apr 23, 2019Updated 6 years ago
- We report a section-wide NLRome for the tuber-bearing section Petota, including the most important non-cereal food crop potato. Evolution…☆19Oct 31, 2025Updated 4 months ago
- renders a KEGGML file and displays a KEGG pathway☆10Jul 14, 2016Updated 9 years ago
- ☆11Apr 19, 2019Updated 6 years ago
- Endoscopic and Pathological data extraction for various endo-pathological data extraction☆13Sep 2, 2024Updated last year
- A bash/biobash library for workflow and pipeline design☆10Jul 2, 2025Updated 8 months ago
- Boiler: a software tool for highly efficient, lossy compression of RNA-seq alignments☆13Jul 14, 2016Updated 9 years ago
- Continuous Wavelet Transform. Based on the work of Roger Fearick.☆13Feb 22, 2016Updated 10 years ago