RNA-seq Analysis Pipeline Testing and Optimization Resource - Intelligent pipeline selection and comprehensive benchmarking.
☆20Oct 15, 2026Updated 2 weeks ago
Alternatives and similar repositories for RAPTOR
Users that are interested in RAPTOR are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Annotation-independent molecular-evidence archives for single-cell RNA-seq☆19Oct 8, 2026Updated 3 weeks ago
- ☆15Oct 22, 2026Updated last week
- deepBreaks , a computational method, aims to identify important changes in association with the phenotype of interest using multi-alignme…☆12Aug 12, 2026Updated 2 months ago
- Exact, SIMD-accelerated sequence alignment (Smith-Waterman, Needleman-Wunsch, semi-global, overlap)☆12Aug 10, 2026Updated 2 months ago
- Pareto Task Inference in Python☆23Oct 19, 2026Updated last week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- 🌿🫐 bramble: project spliced genomic alignments into transcriptomic space☆19Oct 4, 2026Updated 3 weeks ago
- ☆28Jan 29, 2026Updated 9 months ago
- End-to-end provenance tracking throughout transcript merging and interpretation☆19Oct 19, 2026Updated last week
- CLIP-seq Analysis of Multi-mapped reads☆32Jul 20, 2021Updated 5 years ago
- ☆11Mar 2, 2024Updated 2 years ago
- scCellFie infers metabolic activities from single-cell and spatial transcriptomics and offers a variety of downstream analyses.☆65Oct 16, 2026Updated 2 weeks ago
- Fast long-read RNA-seq mapping to a transcriptome with locally consistent parsing☆21Updated this week
- cnv-seq with custom bugfix☆10Mar 23, 2013Updated 13 years ago
- ☆11Aug 8, 2026Updated 2 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Terminal + web UI for browsing Nextflow tasks, logs, and output files☆12Sep 13, 2026Updated last month
- End-guided RNA assembler☆15Dec 2, 2025Updated 10 months ago
- Nascent Transcription Processing Pipeline☆12Apr 6, 2026Updated 6 months ago
- LAAVA: Long-read AAV Analysis☆13Dec 9, 2025Updated 10 months ago
- Automated RNA-seq downstream analysis framework for differential expression, visualization, GO enrichment, and HTML reporting in R.☆47May 10, 2026Updated 5 months ago
- Analyzing RNA-Seq with approximate likelihood☆26Dec 13, 2020Updated 5 years ago
- A tool to annotate human VCF files with PolyPhen2 effect measures☆10Dec 26, 2022Updated 3 years ago
- خلاصه فصل ها، نکات کلیدی و مفاهیم کاربردی کتاب با تمرکز بر درک عمیق تر لینوکس.☆33Sep 21, 2026Updated last month
- Tutorials for diffxpy.☆11Nov 1, 2019Updated 6 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Shiny app to easily create publishable plots for scientific papers☆44Aug 9, 2025Updated last year
- A tool for projecting genomic alignments to transcriptomic coordinates☆37May 28, 2024Updated 2 years ago
- Wrapper for the genoPlotR R package. This wrapper makes phylogeny, genbank files and blast comparisons that is needed for the genoPLotR p…☆14Oct 5, 2021Updated 5 years ago
- Artisanal 🤣 bioinformatics tools and pipelines in Scala☆20Jan 28, 2020Updated 6 years ago
- A practical guide to modern bioinformatics☆35Jul 27, 2026Updated 3 months ago
- An adaptable Snakemake workflow which uses GATKs best practice recommendations to perform germline mutation calling starting with BAM fil…☆11Sep 17, 2021Updated 5 years ago
- Lifeweb AI team Language Models☆16Mar 11, 2024Updated 2 years ago
- pretrained LookingGlass language model for biological read-length DNA sequences, and related models derived from transfer learning☆17Feb 19, 2026Updated 8 months ago
- B-cell Hybrid Immune Variant Engine☆12Oct 16, 2026Updated 2 weeks ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Using combined evidence from replicates to evaluate ChIP-seq peaks☆22Mar 14, 2026Updated 7 months ago
- Rank binders by structure modeling☆11Apr 10, 2026Updated 6 months ago
- Pipeline to analyse ChIP-Rx data, i.e ChIP-Seq with reference exogenous genome spike-in normalization☆14Apr 11, 2026Updated 6 months ago
- 🧬 Analyzing compression algorithms for genomic sequencing data☆12Feb 14, 2020Updated 6 years ago
- ☆12May 4, 2021Updated 5 years ago
- EasyDockVina is a free tool to perform for receptor with multiple (batch) ligand docking with AutoDockVina.☆13Nov 22, 2024Updated last year
- A flexible python program for generating figures from regions of the genome.☆13Apr 6, 2019Updated 7 years ago