yuanyc06 / deepgeneLinks
Source code of the paper "DeepGene: an advanced cancer type classifier based on deep learning and somatic point mutations"
☆13Updated 7 years ago
Alternatives and similar repositories for deepgene
Users that are interested in deepgene are comparing it to the libraries listed below
Sorting:
- A hybrid deep convolutional neural network for predicting chromatin accessibility☆24Updated 6 years ago
- GEDFN: Graph-Embedded Deep Feedforward Network☆23Updated 6 years ago
- iDeep: integrated prediction of RNA-protein binding sites using deep learning☆39Updated 4 years ago
- Understanding sequence conservation with deep learning☆20Updated 8 years ago
- Chromatin Accessibility Prediction via Convolutional Long Short-Term Memory Networks with k-mer Embedding☆14Updated 6 years ago
- Data Integration tool utilizing network information for predictive analyses☆16Updated 3 weeks ago
- Deep Motif (ICLR16)/ Deep Motif Dashboard (PSB17): Visualizing Genomic Sequence Classifications☆46Updated 6 years ago
- Perform hyper-parameter tuning, training, testing and prediction with Keras☆44Updated 7 years ago
- insilico Pathway Activation Network Decomposition Analysis (iPANDA) package. Owned by Insilico Medicine Inc. iPANDA is a pathway analysis…☆25Updated 8 years ago
- DLPRB: A Deep Learning Approach for Predicting Protein-RNA Binding☆13Updated 6 years ago
- 🧛 Deep generative models for TCR sequences 🧛☆17Updated 3 years ago
- Deep proteome inference from peptide profiles☆13Updated 4 years ago
- Python 2.7 package with examples for evaluating a network's ability to group a given node set in network proximity.☆32Updated 2 years ago
- This repository contains the code, and access to the pretrained models and datasets for the paper: "Automated analysis of high-content mi…☆50Updated 8 years ago
- ☆19Updated 4 years ago
- DeepMetabolism is a deep learning algorithm to predict phenotype from genome sequencing☆31Updated 7 years ago
- ERGO is a deep learing based model for predicting TCR-peptide binding.☆17Updated 2 years ago
- Bioinformatics16: DeepChrome: Deep-learning for predicting gene expression from histone modifications☆63Updated 4 years ago
- Amino acid embedding and Convolutional Neural Network for HLA Class I-peptide binding prediction☆25Updated 7 years ago
- Website for visualizing predicted drug side-effects using L1000 data (http://maayanlab.net/SEP-L1000/)☆10Updated 3 years ago
- Large-scale automatic feature selection for biomarker discovery in high-dimensional OMICs data☆30Updated last year
- A deep learning package for predicting TF binding☆42Updated 5 years ago
- A deep learning approach for predicting high-confidence neoantigens by considering both the presentation possibilities of mutant peptides…☆43Updated 2 years ago
- mRNN is an implementation of a Gated Recurrent Unit (GRU) network for classification of transcripts as either coding or noncoding.☆21Updated 6 years ago
- Concise: Keras extension for regulatory genomics☆35Updated 2 years ago
- Docker image for the DeepBind method.☆16Updated 9 years ago
- Codes and data for the paper entitled "Learning representations to predict intermolecular interactions on large-scale heterogeneous molec…☆1Updated 11 months ago
- End-to-end deep learning toolkit for predicting protein binding sites and motifs.☆45Updated 6 years ago
- ☆13Updated 5 years ago
- Connectivity Map analysis in MATLAB☆45Updated 3 years ago