Source code of the paper "DeepGene: an advanced cancer type classifier based on deep learning and somatic point mutations"
☆13Sep 7, 2017Updated 8 years ago
Alternatives and similar repositories for deepgene
Users that are interested in deepgene are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆21Sep 4, 2020Updated 5 years ago
- Convert VCF (Variant Call Format) into TCGA MAF (Mutation Annotation Format)☆15Jul 15, 2016Updated 9 years ago
- This repository contains the source code of the revised version of MutPanning. MutPanning is publicly available under the BSD3-Clause ope…☆13Nov 12, 2019Updated 6 years ago
- ☆36Sep 6, 2017Updated 8 years ago
- Code for KekuleScope☆11Nov 22, 2022Updated 3 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Python implementation of state-of-art meta-heuristic and evolutionary optimization algorithms.☆12Jun 29, 2022Updated 3 years ago
- Public repository for building and analyzing protein complex maps☆12Dec 6, 2016Updated 9 years ago
- Somatic point mutation caller☆17Jul 8, 2016Updated 9 years ago
- Coevolutionary Multi-task learning for Dynamic Time Series prediction☆15Jul 13, 2021Updated 4 years ago
- ☆11Aug 3, 2018Updated 7 years ago
- Using Machine Learning to Identify Glioblastoma patients with NF1 inactivation☆11Dec 19, 2016Updated 9 years ago
- A curated list of awesome deep learning applications in the field of computational biology☆11Aug 3, 2016Updated 9 years ago
- A repository housing metadata and data files (or links to data files) that are being prepared as sample data bundles for various uses.☆13Feb 12, 2022Updated 4 years ago
- Experiments to run single cell analyses efficiently at scale using Zarr, anndata, Scanpy, and Apache Spark☆15Mar 28, 2019Updated 7 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- This is the repository for paper titled as "Convolutional neural network models for cancer type prediction based on gene expression".☆12Dec 9, 2020Updated 5 years ago
- Multi-Objective Low-Thrust Optimizer for Three Body Problem☆13Aug 23, 2021Updated 4 years ago
- Deep proteome inference from peptide profiles☆13Jul 16, 2020Updated 5 years ago
- Use of Deep Learning to Predict IDH status from MR Imaging☆17Mar 3, 2018Updated 8 years ago
- Stack denoising autoencoder (SdA) code in "Deep learning based functional site-level and UTR-level human miRNA target prediction"☆11May 7, 2019Updated 6 years ago
- OncoNetExplainer: Explainable Prediction of Cancer Types Based on Gene Expression Data☆11Feb 28, 2023Updated 3 years ago
- TCGA Benchmark Tasks for Clinical Attribute Prediction based on Genome☆14Mar 16, 2021Updated 5 years ago
- Frontend for CRM (MIT)☆14Jul 6, 2015Updated 10 years ago
- ☆28Jul 6, 2016Updated 9 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Bayesian Nonparametric Mixture Models in Julia☆14Oct 25, 2017Updated 8 years ago
- This repository contains the code, and access to the pretrained models and datasets for the paper: "Automated analysis of high-content mi…☆50Apr 30, 2017Updated 9 years ago
- ☆22Jul 2, 2020Updated 5 years ago
- A pan-cancer genome-wide analysis reveals tumour dependencies by induction of nonsense-mediated decay☆15Nov 2, 2020Updated 5 years ago
- g2-MLP: State-of-the-Art Model for Node Classification on Graphs (PPI Dataset)☆10Nov 12, 2022Updated 3 years ago
- Easy and fast deep learning☆21May 30, 2018Updated 7 years ago
- ☆18Sep 28, 2015Updated 10 years ago
- Improved Scaffold Hopping in Ligand-based Virtual Screening Using Neural Representation Learning☆21Mar 9, 2021Updated 5 years ago
- A GenePattern module for running the ssGSEA method☆16Mar 3, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- RefDNN: a reference drug based neural network for more accurate prediction of anticancer drug resistance (Scientific Reports)☆14Apr 21, 2022Updated 4 years ago
- Code for pmVAE model, seen in ICML CompBio '21☆12Apr 12, 2024Updated 2 years ago
- Pipeline analysis for whole exome sequencing of pancreatic cancer PDX models☆23Oct 22, 2018Updated 7 years ago
- ☆23Nov 9, 2025Updated 5 months ago
- A type-checker which can process recursive types and data☆12Jan 22, 2019Updated 7 years ago
- PathwayMapper: An interactive and collaborative graphical curation tool for cancer pathways☆63Mar 18, 2024Updated 2 years ago
- This repo contains completed exercises (code in MATLAB) of Prof. Andrew Ng's Unsupervised Feature Learning and Deep Learning (UFLDL) onli…☆22Apr 2, 2015Updated 11 years ago