Source code of the paper "DeepGene: an advanced cancer type classifier based on deep learning and somatic point mutations"
☆13Sep 7, 2017Updated 8 years ago
Alternatives and similar repositories for deepgene
Users that are interested in deepgene are comparing it to the libraries listed below
Sorting:
- Code for KekuleScope☆11Nov 22, 2022Updated 3 years ago
- ☆21Sep 4, 2020Updated 5 years ago
- Somatic point mutation caller☆17Jul 8, 2016Updated 9 years ago
- ☆22Jul 2, 2020Updated 5 years ago
- Lint Nextflow pipelines in Python.☆11Jan 23, 2025Updated last year
- ☆36Sep 6, 2017Updated 8 years ago
- DeepGO with Fuzzy DL☆32Sep 19, 2022Updated 3 years ago
- Phasing of dikaryotic fungal genome assemblies☆13Mar 1, 2023Updated 3 years ago
- ☆14Mar 22, 2018Updated 7 years ago
- ☆34Jun 12, 2019Updated 6 years ago
- For when you just need a coverage plot.☆11Mar 26, 2021Updated 4 years ago
- lncRNA-Py is a development package for applying machine learning and deep learning to the problem of lncRNA classification, i.e. predicti…☆12Jan 24, 2025Updated last year
- Translocator: local realignment and global remapping enabling accurate translocation detection using single-molecule sequencing long read…☆12Jan 22, 2020Updated 6 years ago
- An extension for the GitHub Cli application that displays your current contribution graph☆14Aug 3, 2021Updated 4 years ago
- Msuite2: integrated DNA methylation data analysis toolkit with enhanced performance☆10Jan 21, 2025Updated last year
- your friendly pangenome graph genotyper☆10Feb 6, 2023Updated 3 years ago
- g2-MLP: State-of-the-Art Model for Node Classification on Graphs (PPI Dataset)☆10Nov 12, 2022Updated 3 years ago
- Scotch pipeline for indel calling.☆10Nov 25, 2019Updated 6 years ago
- Using Machine Learning to Identify Glioblastoma patients with NF1 inactivation☆11Dec 19, 2016Updated 9 years ago
- ☆16Jan 14, 2026Updated last month
- [Archived] SnakeMake pipeline to run BlobTools on public assemblies☆11Jul 3, 2023Updated 2 years ago
- Python scripts for Exploratory Data Analysis of Pacific Biosciences sequence data☆18Aug 13, 2014Updated 11 years ago
- Analysis tool for Nanopore sequencing data☆11Apr 26, 2024Updated last year
- ☆11Nov 17, 2020Updated 5 years ago
- This is a machine learning challenge conducted by C&D Labs and Future Group in association with HackerEarth.☆10Nov 17, 2017Updated 8 years ago
- PanEffect is a JavaScript framework to explore variant effects across a pangenome. The tool has two views that allows a user to (1) expl…☆13Jan 30, 2024Updated 2 years ago
- A flexible and fast sgRNA counter from FASTQ Files☆11Dec 29, 2025Updated 2 months ago
- NEFF Calculator and MSA File Converter☆13Sep 16, 2025Updated 5 months ago
- Genome-wide reconstruction of complex structural variants☆39Jun 21, 2022Updated 3 years ago
- Python module that gives current information about orbital objects of interest☆12Dec 23, 2022Updated 3 years ago
- pretrained LookingGlass language model for biological read-length DNA sequences, and related models derived from transfer learning☆15Feb 19, 2026Updated 2 weeks ago
- Public repository for building and analyzing protein complex maps☆11Dec 6, 2016Updated 9 years ago
- ViromeScan allows the user to explore and taxonomically characterize the virome from metagenomic reads, efficiently denoising samples fro…☆13Feb 13, 2023Updated 3 years ago
- ☆10May 22, 2025Updated 9 months ago
- ☆17May 30, 2018Updated 7 years ago
- My practical approach to learning Neural Network concepts☆10Jun 11, 2019Updated 6 years ago
- Implementation of AlphaZero in PyTorch.☆10Apr 19, 2019Updated 6 years ago
- Solve ciphers with python☆10Oct 24, 2018Updated 7 years ago
- Official Pytorch implementation of Chromatic Graph Transformers☆10Jun 14, 2023Updated 2 years ago